RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 LAYNQ6UX15 382 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 MMS22LQ6ZRQ5 1243 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 SND1Q7KZF4 910 aaKnown RBP eCLIP16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 IQCHQ86VS3 1027 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 CHSY1Q86X52 802 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 ATP6V0D2Q8N8Y2 350 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 FRS2Q8WU20 508 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 SLC6A18Q96N87 628 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 SPAG5Q96R06 1193 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 ERVMER34-1Q9H9K5 563 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 ST7Q9NRC1 585 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 PCDHGC3Q9UN70 934 aa16.64■□□□□ 0.25
CALCOCO1-220ENST00000552282 GTPBP10A4D1E9 387 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 F5H5T6 163 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 CAPN9O14815 690 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 ALOX15BO15296 676 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 WNT1P04628 370 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 C1SP09871 688 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 HOXB3P14651 431 aaPredicted RBP16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 CD38P28907 300 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 GNA15P30679 374 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 RXRGP48443 463 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 C21orf59P57076 290 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 SHBQ15464 509 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 ZC3H12AQ5D1E8 599 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 RAP1GAP2Q684P5 730 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 KLHL10Q6JEL2 608 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 TRIM65Q6PJ69 517 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 ADAT2Q7Z6V5 191 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 TMPRSS12Q86WS5 348 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 MMAAQ8IVH4 418 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 APCDD1Q8J025 514 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 LGI2Q8N0V4 545 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 CCAR2Q8N163 923 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 CFAP52Q8N1V2 620 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 OXR1Q8N573 874 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 ADAM32Q8TC27 787 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 SAP25Q8TEE9 199 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 SHC3Q92529 594 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 ALG14Q96F25 216 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 SLCO3A1Q9UIG8 710 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 ARID1BQ8NFD5 2236 aaPredicted RBP16.63■□□□□ 0.25
CALCOCO1-220ENST00000552282 A0A087WV48 116 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 BECN2A8MW95 431 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 ATP9BO43861 1147 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 RNASEH2AO75792 299 aaKnown RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 FGFR1OPO95684 399 aaKnown RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 MOCS2O96007 188 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 EPHA8P29322 1005 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 PITX1P78337 314 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 OVGP1Q12889 678 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 RABGAP1LQ5R372 815 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 SFMBT2Q5VUG0 894 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 RNF219Q5W0B1 726 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 PDCD7Q8N8D1 485 aaKnown RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 MDM1Q8TC05 714 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 TSC1Q92574 1164 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 PPP1R9BQ96SB3 815 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 OMDQ99983 421 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 GDF3Q9NR23 364 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 FTSJ1Q9UET6 329 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 DMTF1Q9Y222 760 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 OR51B4Q9Y5P0 310 aa16.62■□□□□ 0.25
CALCOCO1-220ENST00000552282 URB1O60287 2271 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 PLRG1O43660 514 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 HSF2BPO75031 334 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 KRT5P13647 590 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 CCR1P32246 355 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 NNMTP40261 264 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 NXPH1P58417 271 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 EFHC1Q5JVL4 640 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 ISM2Q6H9L7 571 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 NAPEPLDQ6IQ20 393 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 SLC26A9Q7LBE3 791 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 KANSL1Q7Z3B3 1105 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 DSG4Q86SJ6 1040 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 TRIM69Q86WT6 500 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 CACTIN-AS1Q8N1I8 211 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 STK40Q8N2I9 435 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 WDTC1Q8N5D0 677 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 MFSD2AQ8NA29 543 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 ZNF397Q8NF99 534 aaPredicted RBP16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 SRRTQ9BXP5 876 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 TMEM51Q9NW97 253 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 ARHGAP20Q9P2F6 1191 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 APEX2Q9UBZ4 518 aa16.61■□□□□ 0.25
CALCOCO1-220ENST00000552282 THAP12O43422 761 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 ABCB4P21439 1286 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 PSMD8P48556 350 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 STK19P49842 368 aaPredicted RBP16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 CDK17Q00537 523 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 BECN1Q14457 450 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 FBXL22Q6P050 247 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 OLFML1Q6UWY5 402 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 GANCQ8TET4 914 aa16.6■□□□□ 0.25
CALCOCO1-220ENST00000552282 RPL10LQ96L21 214 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms