RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SLC26A4O43511 780 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 RGS9O75916 674 aaPredicted RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 STC2O76061 302 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 GCNT3O95395 438 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 CST3P01034 146 aaPredicted RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 KLKB1P03952 638 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 DNTTP04053 509 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 IGHV4-34P06331 123 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 HMBSP08397 361 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 CCDC130P13994 396 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 ARRB1P49407 418 aaPredicted RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 CASP5P51878 434 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 HMGN5P82970 282 aaKnown RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 EIF4HQ15056 248 aaKnown RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 E2F5Q15329 346 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 WDR72Q3MJ13 1102 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 TTC31Q49AM3 519 aaPredicted RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 RILPL1Q5EBL4 403 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 ARL6IP4Q66PJ3 421 aaKnown RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 TMEM215Q68D42 235 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 NCEH1Q6PIU2 408 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 GPRIN1Q7Z2K8 1008 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 TRAPPC11Q7Z392 1133 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 CBWD2Q8IUF1 395 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 CACTIN-AS1Q8N1I8 211 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 GPD1LQ8N335 351 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 DTWD1Q8N5C7 304 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 ZMIZ2Q8NF64 920 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 ZDHHC1Q8WTX9 485 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 JAKMIP2Q96AA8 810 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 SKA1Q96BD8 255 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 SMARCD1Q96GM5 515 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 SMOQ99835 787 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 LLPHQ9BRT6 129 aaKnown RBP5.62□□□□□ -1.51
HOXB3-213ENST00000552000 FGFBP2Q9BYJ0 223 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 FBXO44Q9H4M3 255 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 SMYD3Q9H7B4 428 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 EBF2Q9HAK2 575 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 NMUR1Q9HB89 426 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 SGK2Q9HBY8 427 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 PRSS16Q9NQE7 514 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 COMMD8Q9NX08 183 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 ANKMY1Q9P2S6 941 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 ADAMTS1Q9UHI8 967 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 CNTRLQ7Z7A1 2325 aa5.62□□□□□ -1.51
HOXB3-213ENST00000552000 ZFHX3Q15911 3703 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 A0A1W2PR77 199 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF233A6NK53 670 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 K7ENP7 123 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SIGLEC6O43699 453 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ZFC3H1O60293 1989 aaKnown RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SDC3O75056 442 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 USP12O75317 370 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 BEST1O76090 585 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 CLSTN1O94985 981 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 CYBBP04839 570 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 FAM163BP0C2L3 166 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 DLATP10515 647 aaKnown RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 RARGP13631 454 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 GAP43P17677 238 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 TNNI1P19237 187 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 FSTP19883 344 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 CD38P28907 300 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 CORO1AP31146 461 aaKnown RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 CHKAP35790 457 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 RXRGP48443 463 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 LSSP48449 732 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 GALCP54803 685 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 MAP3K7CLP57077 242 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ERVPABLB-1P60509 514 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 MYL6P60660 151 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 DAB2P98082 770 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 E2F1Q01094 437 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ZBTB16Q05516 673 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 GRIN1Q05586 938 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 KCNJ12Q14500 433 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SURF1Q15526 300 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SFMBT2Q5VUG0 894 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF776Q68DI1 518 aaPredicted RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 INO80CQ6PI98 192 aaPredicted RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SCARA5Q6ZMJ2 495 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF574Q6ZN55 896 aaPredicted RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ATG14Q6ZNE5 492 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ACOT1Q86TX2 421 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 WDR49Q8IV35 697 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 FUKQ8N0W3 1084 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 LSMEM2Q8N112 164 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 EXD3Q8N9H8 876 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SLC2A14Q8TDB8 520 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 DDI1Q8WTU0 396 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 SNRNP27Q8WVK2 155 aaKnown RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ELMO3Q96BJ8 720 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 DNAJC19Q96DA6 116 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 AK8Q96MA6 479 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ARHGEF17Q96PE2 2063 aaPredicted RBP5.61□□□□□ -1.51
HOXB3-213ENST00000552000 TMEM245Q9H330 911 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 MTG2Q9H4K7 406 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 VRTNQ9H8Y1 702 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 FBRSQ9HAH7 460 aa5.61□□□□□ -1.51
HOXB3-213ENST00000552000 ASCL3Q9NQ33 180 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms