RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TTC17Q96AE7 1141 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 LMLNQ96KR4 655 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 ACOX2Q99424 681 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 MAGEB5Q9BZ81 275 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 ZDHHC4Q9NPG8 344 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 LUC7LQ9NQ29 371 aaKnown RBP10.93□□□□□ -0.66
PTCH1-225ENST00000551845 SPTLC3Q9NUV7 552 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 C2orf42Q9NWW7 574 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 MPP6Q9NZW5 540 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 SUN2Q9UH99 717 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 PCSK1NQ9UHG2 260 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 ANAPC7Q9UJX3 599 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 RALYQ9UKM9 306 aaKnown RBP10.93□□□□□ -0.66
PTCH1-225ENST00000551845 HCN2Q9UL51 889 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 INTUQ9ULD6 942 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 TBC1D30Q9Y2I9 924 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 STON1Q9Y6Q2 735 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 OTOGLQ3ZCN5 2332 aa10.93□□□□□ -0.66
PTCH1-225ENST00000551845 COL4A3Q01955 1670 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CEP250Q9BV73 2442 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 EIF3CLB5ME19 914 aaKnown RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 WASH3PC4AMC7 463 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CREB3O43889 395 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 SYNCRIPO60506 623 aaKnown RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 ADAM23O75077 832 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 LRIG2O94898 1065 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 IPO7O95373 1038 aaKnown RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 APBB3O95704 486 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 HOXB2P14652 356 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 RHOQP17081 205 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 MIPP30301 263 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CNR2P34972 360 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CSKP41240 450 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 KRT83P78385 493 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 ZNF234Q14588 700 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 STARD3Q14849 445 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 HADHQ16836 314 aaKnown RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 PLEKHG6Q3KR16 790 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 ALFQ53S48 1182 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 PITRM1Q5JRX3 1037 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 RNF219Q5W0B1 726 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 HEATR6Q6AI08 1181 aaKnown RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 SERPINA13PQ6UXR4 307 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 TMEM92Q6UXU6 159 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CIR1Q86X95 450 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 PSTKQ8IV42 348 aaKnown RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 RHOT2Q8IXI1 618 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 APCDD1Q8J025 514 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 PGBD3Q8N328 593 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 ARFGAP1Q8N6T3 406 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 SLC35G2Q8TBE7 412 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 ZNF564Q8TBZ8 553 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 SORCS1Q8WY21 1168 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 NELL1Q92832 810 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 TBC1D31Q96DN5 1066 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 ARHGEF26Q96DR7 871 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 EIF3CQ99613 913 aaKnown RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 EPAS1Q99814 870 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 GABRG3Q99928 467 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 BAG1Q99933 345 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 FEM1AQ9BSK4 669 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 PACSIN1Q9BY11 444 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 TRIM7Q9C029 511 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 MUC3BQ9H195 1237 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CATSPERBQ9H7T0 1116 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 POLR3BQ9NW08 1133 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CACNA2D2Q9NY47 1150 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 DONSONQ9NYP3 566 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 EBF1Q9UH73 591 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 RAB23Q9ULC3 237 aa10.92□□□□□ -0.66
PTCH1-225ENST00000551845 EPN1Q9Y6I3 576 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-225ENST00000551845 CACNA1IQ9P0X4 2223 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ILVBLA1L0T0 632 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 GOLGA6L3A6NEY3 463 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 FAM72CH0Y354 149 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 AXIN1O15169 862 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 DAPK3O43293 454 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 LRCH4O75427 683 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 LCA5LO95447 670 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 EPHX1P07099 455 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 RHOCP08134 193 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 SRPRAP08240 638 aaKnown RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 TDGF1P13385 188 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 MZF1P28698 734 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 EPHB2P29323 1055 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ARHGAP25P42331 645 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 IL12RB1P42701 662 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 SSR1P43307 286 aaKnown RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 PXNP49023 591 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 FNTBP49356 437 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 IRAK1P51617 712 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ZNF135P52742 658 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ECT2LQ008S8 904 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 DMWDQ09019 674 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ZNF252P-AS1Q0IIN9 211 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 ENPP2Q13822 863 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 COL9A2Q14055 689 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-225ENST00000551845 FUT11Q495W5 492 aa10.91□□□□□ -0.66
PTCH1-225ENST00000551845 FNDC3BQ53EP0 1204 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms