RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SPTBN1Q01082 2364 aaKnown RBP14.96□□□□□ -0.02
VPS29-209ENST00000551655 SPENQ96T58 3664 aaKnown RBP14.95□□□□□ -0.02
VPS29-209ENST00000551655 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.95□□□□□ -0.02
VPS29-209ENST00000551655 EDDM13A0A1B0GTR0 161 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 ENO4A6NNW6 628 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 PRAMEF26H0Y7S4 382 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 H3BQV1 296 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 SLC31A1O15431 190 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 PLRG1O43660 514 aaKnown RBP14.95□□□□□ -0.02
VPS29-209ENST00000551655 KRT38O76015 456 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 ADH1BP00325 375 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 ITGA2BP08514 1039 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 CD58P19256 250 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 GJB2P29033 226 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 CLDN2P57739 230 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 DLG4P78352 724 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 ZNF177Q13360 481 aaPredicted RBP14.95□□□□□ -0.02
VPS29-209ENST00000551655 PITRM1Q5JRX3 1037 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 PIK3R6Q5UE93 754 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 EPM2AIP1Q7L775 607 aaPredicted RBP14.95□□□□□ -0.02
VPS29-209ENST00000551655 JAMLQ86YT9 394 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 CCDC65Q8IXS2 484 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 SLC22A18ASQ8N1D0 253 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 TMEM145Q8NBT3 493 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 SYNDIG1Q9H7V2 258 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 FBXO2Q9UK22 296 aaPredicted RBP14.95□□□□□ -0.02
VPS29-209ENST00000551655 SARDHQ9UL12 918 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 PCDHGA4Q9Y5G9 962 aa14.95□□□□□ -0.02
VPS29-209ENST00000551655 TARSL2A2RTX5 802 aaKnown RBP14.94□□□□□ -0.02
VPS29-209ENST00000551655 AGRPO00253 132 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 TULP2O00295 520 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 SCAMP1O15126 338 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 HGFP14210 728 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 STAT6P42226 847 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 RPS24P62847 133 aaKnown RBP14.94□□□□□ -0.02
VPS29-209ENST00000551655 ARID5BQ14865 1188 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 ZNF394Q53GI3 561 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 FAM133BQ5BKY9 247 aaKnown RBP14.94□□□□□ -0.02
VPS29-209ENST00000551655 AGBL4Q5VU57 503 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 STXBP4Q6ZWJ1 553 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 PIGZQ86VD9 579 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 TRIM69Q86WT6 500 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 CARNMT1Q8N4J0 409 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 FAM26EQ8N5C1 309 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 ZNF507Q8TCN5 953 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 FUCA2Q9BTY2 467 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 ULBP1Q9BZM6 244 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 DNAJC28Q9NX36 388 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 TPX2Q9ULW0 747 aaKnown RBP14.94□□□□□ -0.02
VPS29-209ENST00000551655 CLIC4Q9Y696 253 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 LRBAP50851 2863 aa14.94□□□□□ -0.02
VPS29-209ENST00000551655 ITIH6Q6UXX5 1313 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 CCDC187A0A096LP49 1063 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 ASLP04424 464 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 SFTPCP11686 197 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 P4HA1P13674 534 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 AFMP43652 599 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 CCR10P46092 362 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 ZNF445P59923 1031 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 INCA1Q0VD86 236 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 CNTN1Q12860 1018 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 SETMARQ53H47 684 aaPredicted RBP14.93□□□□□ -0.02
VPS29-209ENST00000551655 NADSYN1Q6IA69 706 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 OR6B2Q6IFH4 312 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 B3GNT8Q7Z7M8 397 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 APCDD1Q8J025 514 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 ARHGAP18Q8N392 663 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 FIBINQ8TAL6 211 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 ZNF564Q8TBZ8 553 aaPredicted RBP14.93□□□□□ -0.02
VPS29-209ENST00000551655 PARD3BQ8TEW8 1205 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 FAM131CQ96AQ9 280 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 NT5C1AQ9BXI3 368 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 APOBEC3GQ9HC16 384 aaKnown RBP14.93□□□□□ -0.02
VPS29-209ENST00000551655 GEMIN8Q9NWZ8 242 aaKnown RBP14.93□□□□□ -0.02
VPS29-209ENST00000551655 HBS1LQ9Y450 684 aaKnown RBP14.93□□□□□ -0.02
VPS29-209ENST00000551655 ABCA12Q86UK0 2595 aa14.93□□□□□ -0.02
VPS29-209ENST00000551655 DOPEY1Q5JWR5 2465 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 MUSKO15146 869 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 EIF3DO15371 548 aaKnown RBP eCLIP14.92□□□□□ -0.02
VPS29-209ENST00000551655 EXOC3O60645 756 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 RNGTTO60942 597 aaKnown RBP14.92□□□□□ -0.02
VPS29-209ENST00000551655 BMP15O95972 392 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 ASS1P00966 412 aaKnown RBP14.92□□□□□ -0.02
VPS29-209ENST00000551655 TKTL1P51854 596 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 INHBCP55103 352 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 TAS2R38P59533 333 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 DEFB133Q30KQ1 61 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 RAB41Q5JT25 222 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 GCNT7Q6ZNI0 430 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 C14orf80Q86SX3 495 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 CFAP52Q8N1V2 620 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 PDILTQ8N807 584 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 ZNF548Q8NEK5 533 aaPredicted RBP14.92□□□□□ -0.02
VPS29-209ENST00000551655 GRAMD1AQ96CP6 724 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 USP29Q9HBJ7 922 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 LRRC4CQ9HCJ2 640 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 CEP83Q9Y592 693 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 SCN8AQ9UQD0 1980 aa14.92□□□□□ -0.02
VPS29-209ENST00000551655 CENPEQ02224 2701 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms