RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PITRM1Q5JRX3 1037 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 C6orf118Q5T5N4 469 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 RNF219Q5W0B1 726 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 SDE2Q6IQ49 451 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 TRMT11Q7Z4G4 463 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 SETD3Q86TU7 594 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 CHPFQ8IZ52 775 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 TXNDC5Q8NBS9 432 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 OR52K2Q8NGK3 314 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 TEKT4Q8WW24 435 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 ACOX2Q99424 681 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 LACRTQ9GZZ8 138 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 RETREG1Q9H6L5 497 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 PLA2G4CQ9UP65 541 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 PJA2O43164 708 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 DAPK3O43293 454 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 GALR2O43603 387 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 CHRM1P11229 460 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 NTSR1P30989 418 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 HTR7P34969 479 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 NUMBP49757 651 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 PLK1P53350 603 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 TAS2R40P59535 323 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 SATB1Q01826 763 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 KIF5AQ12840 1032 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 EOGTQ5NDL2 527 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 SYT13Q7L8C5 426 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 CYB5D2Q8WUJ1 264 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 TTC17Q96AE7 1141 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 FEM1AQ9BSK4 669 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 MUC3BQ9H195 1237 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 CATSPERBQ9H7T0 1116 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 POLR3BQ9NW08 1133 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 TMEM248Q9NWD8 314 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 C2orf42Q9NWW7 574 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 THAP10Q9P2Z0 257 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 ZNF212Q9UDV6 495 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 DNAI1Q9UI46 699 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 MMP17Q9ULZ9 603 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 SLC8A2Q9UPR5 921 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 NEU3Q9UQ49 428 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 DUSP10Q9Y6W6 482 aa16.67■□□□□ 0.26
CHMP1A-209ENST00000550872 USP34Q70CQ2 3546 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ILVBLA1L0T0 632 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 BTNL10A8MVZ5 291 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 SGK1O00141 431 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 NPC1O15118 1278 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 BUB1O43683 1085 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 BUB1BO60566 1050 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ASLP04424 464 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 KRT7P08729 469 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 DLDP09622 509 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 HOXC13P31276 330 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ARL4AP40617 200 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 SLC1A1P43005 524 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 MAPKAPK2P49137 400 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ZNF135P52742 658 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 CCZ1BP86790 482 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 CCZ1P86791 482 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 CSTF1Q05048 431 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 KRT81Q14533 505 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ZNF234Q14588 700 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 DPYSL2Q16555 572 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ATP13A4Q4VNC1 1196 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ZFYVE27Q5T4F4 411 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 NLRP14Q86W24 1093 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 RTL3Q8N8U3 475 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ALG14Q96F25 216 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 SPON2Q9BUD6 331 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 CACNA2D2Q9NY47 1150 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 SALL4Q9UJQ4 1053 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 VPS28Q9UK41 221 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 HYOU1Q9Y4L1 999 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 OR51B4Q9Y5P0 310 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 ADGRG1Q9Y653 693 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 STON1Q9Y6Q2 735 aa16.66■□□□□ 0.26
CHMP1A-209ENST00000550872 CACNA1HO95180 2353 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 A0A0D9SEW6 157 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 WASH3PC4AMC7 463 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 H3BRJ5 948 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 FGF10O15520 208 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 SPOPO43791 374 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 ADAM23O75077 832 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 TNNT1P13805 278 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 GOT1P17174 413 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 COMTP21964 271 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 CTSOP43234 321 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 HCAR3P49019 387 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 CDH6P55285 790 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 ST8SIA6P61647 398 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 GNA12Q03113 381 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 SULT2A1Q06520 285 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 ANGPT1Q15389 498 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 FNDC3BQ53EP0 1204 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 ZNF783Q6ZMS7 281 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 RFX8Q6ZV50 586 aa16.65■□□□□ 0.26
CHMP1A-209ENST00000550872 KCTD6Q8NC69 237 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms