RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 HARS2P49590 506 aaKnown RBP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 ADCY2Q08462 1091 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 FAM133BQ5BKY9 247 aaKnown RBP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 ANKRD20A8PQ5CZ79 823 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 DGKKQ5KSL6 1271 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 SEL1L2Q5TEA6 688 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 SLC9A4Q6AI14 798 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 DDX42Q86XP3 938 aaKnown RBP eCLIP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 ARID3BQ8IVW6 561 aaPredicted RBP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 SYNPOQ8N3V7 929 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 PQLC3Q8N755 202 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 PCDH19Q8TAB3 1148 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 RNF34Q969K3 372 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 CSPG4P5Q96PW8 444 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 DCLK3Q9C098 648 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 NACA2Q9H009 215 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 PPARGC1AQ9UBK2 798 aaKnown RBP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 AGO1Q9UL18 857 aaKnown RBP12.47□□□□□ -0.41
ERBB3-216ENST00000550869 SNX10Q9Y5X0 201 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 NUP205Q92621 2012 aa12.47□□□□□ -0.41
ERBB3-216ENST00000550869 NCOR2Q9Y618 2525 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 TCRBV7S2A1N4TA0A589 114 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 E2F8A0AVK6 867 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 H3BRJ5 948 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 PGRMC1O00264 195 aaKnown RBP12.46□□□□□ -0.41
ERBB3-216ENST00000550869 LEFTY2O00292 366 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 DCLK1O15075 740 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 FGGP02679 453 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 CKMP06732 381 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 HMBSP08397 361 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 KRT10P13645 584 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 GOT1P17174 413 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 TGM1P22735 817 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 CORO1AP31146 461 aaKnown RBP12.46□□□□□ -0.41
ERBB3-216ENST00000550869 CETN2P41208 172 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 AUHQ13825 339 aaKnown RBP12.46□□□□□ -0.41
ERBB3-216ENST00000550869 KRT81Q14533 505 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 ZNF77Q15935 545 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 CYP1B1Q16678 543 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 ADGRF1Q5T601 910 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 BBS12Q6ZW61 710 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 C14orf80Q86SX3 495 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 RIN3Q8TB24 985 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 RSPRY1Q96DX4 576 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
ERBB3-216ENST00000550869 RTKNQ9BST9 563 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 RETREG1Q9H6L5 497 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 TDP1Q9NUW8 608 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 SMPD4Q9NXE4 827 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 ZNF212Q9UDV6 495 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 CHD5Q8TDI0 1954 aa12.46□□□□□ -0.41
ERBB3-216ENST00000550869 E9PAM4 449 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 SPECC1L-ADORA2AF8WAN1 911 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 TJP3O95049 919 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 PRAMEF12O95522 483 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 RETP07949 1114 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 HOXA6P31267 233 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 SLC6A4P31645 630 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 CTHP32929 405 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 AVPR1AP37288 418 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 ARL4AP40617 200 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 PAFAH1B1P43034 410 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 SLC11A2P49281 568 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 SATB1Q01826 763 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 USP4Q13107 963 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 TFDP2Q14188 446 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 PAFAH1B3Q15102 231 aaKnown RBP12.45□□□□□ -0.42
ERBB3-216ENST00000550869 PPP6R3Q5H9R7 873 aaPredicted RBP12.45□□□□□ -0.42
ERBB3-216ENST00000550869 ZFYVE27Q5T4F4 411 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 RNF43Q68DV7 783 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 FBXL22Q6P050 247 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 RFX8Q6ZV50 586 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 NLRP14Q86W24 1093 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 LONP2Q86WA8 852 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 DENND1CQ8IV53 801 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 CCDC50Q8IVM0 306 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 CPXM2Q8N436 756 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 PLD5Q8N7P1 536 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 SH3RF2Q8TEC5 729 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 CAPZA3Q96KX2 299 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 EPAS1Q99814 870 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 SIK2Q9H0K1 926 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 KIF9Q9HAQ2 790 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 THG1LQ9NWX6 298 aaKnown RBP12.45□□□□□ -0.42
ERBB3-216ENST00000550869 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 CCL26Q9Y258 94 aa12.45□□□□□ -0.42
ERBB3-216ENST00000550869 RALGAPA1Q6GYQ0 2036 aa12.44□□□□□ -0.42
ERBB3-216ENST00000550869 GOLGA6L7A0A1B0GV03 622 aa12.44□□□□□ -0.42
ERBB3-216ENST00000550869 EEF2KO00418 725 aaKnown RBP12.44□□□□□ -0.42
ERBB3-216ENST00000550869 CREB3O43889 395 aa12.44□□□□□ -0.42
ERBB3-216ENST00000550869 CST8O60676 142 aa12.44□□□□□ -0.42
ERBB3-216ENST00000550869 MOCS2O96007 188 aaPredicted RBP12.44□□□□□ -0.42
ERBB3-216ENST00000550869 ZFXP17010 805 aaPredicted RBP12.44□□□□□ -0.42
ERBB3-216ENST00000550869 ERCC2P18074 760 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms