RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TBC1D30Q9Y2I9 924 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 OR51B4Q9Y5P0 310 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 CKAP5Q14008 2032 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 ANKRD36A6QL64 1941 aa13.88□□□□□ -0.19
ERBB3-215ENST00000550828 KRBA1A5PL33 1030 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 SPECC1L-ADORA2AF8WAN1 911 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 KCNK3O14649 394 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 FGF10O15520 208 aaPredicted RBP13.87□□□□□ -0.19
ERBB3-215ENST00000550828 MFSD11O43934 449 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 CLDN11O75508 207 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 CYBBP04839 570 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 PTPN7P35236 360 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 ZNF135P52742 658 aaPredicted RBP13.87□□□□□ -0.19
ERBB3-215ENST00000550828 PTPN5P54829 565 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 AMPD2Q01433 879 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 KDSRQ06136 332 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 PPP2R5EQ16537 467 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 GEN1Q17RS7 908 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 TFDP3Q5H9I0 405 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 TMEM215Q68D42 235 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 SLC9A4Q6AI14 798 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 NPNTQ6UXI9 565 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 KIAA0907Q7Z7F0 614 aaPredicted RBP13.87□□□□□ -0.19
ERBB3-215ENST00000550828 MFN1Q8IWA4 741 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 UBL4BQ8N7F7 174 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 OR7D4Q8NG98 312 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 FIBINQ8TAL6 211 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 CSGALNACT1Q8TDX6 532 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 COG1Q8WTW3 980 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 RBM41Q96IZ5 413 aaKnown RBP13.87□□□□□ -0.19
ERBB3-215ENST00000550828 HEMGNQ9BXL5 484 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 DNAJC17Q9NVM6 304 aaKnown RBP13.87□□□□□ -0.19
ERBB3-215ENST00000550828 DNAI1Q9UI46 699 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERBB3-215ENST00000550828 PIAS3Q9Y6X2 628 aa13.87□□□□□ -0.19
ERBB3-215ENST00000550828 A0A0D9SEW6 157 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 ACVRL1P37023 503 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 CSKP41240 450 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 GBE1Q04446 702 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 SLC10A2Q12908 348 aaPredicted RBP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 PAFAH1B3Q15102 231 aaKnown RBP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 FUT11Q495W5 492 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 PAPD7Q5XG87 772 aaKnown RBP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 KAZNQ674X7 775 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 BMP8AQ7Z5Y6 402 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 CCDC50Q8IVM0 306 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 APCDD1Q8J025 514 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 CCDC33Q8N5R6 958 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 CELF6Q96J87 481 aaKnown RBP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 NAPGQ99747 312 aaPredicted RBP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 OSBPL8Q9BZF1 889 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 CARD9Q9H257 536 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 LRRC19Q9H756 370 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 CATSPERBQ9H7T0 1116 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 ABCB8Q9NUT2 735 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 SAE1Q9UBE0 346 aaPredicted RBP13.86□□□□□ -0.19
ERBB3-215ENST00000550828 HCN2Q9UL51 889 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 CA14Q9ULX7 337 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
ERBB3-215ENST00000550828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-215ENST00000550828 PRRT4C9JH25 899 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 ZNF185O15231 689 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 CST8O60676 142 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 MAP3K6O95382 1288 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 RHOCP08134 193 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 GLDCP23378 1020 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 OR1E1P30953 314 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 MAPKAPK2P49137 400 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 COPS2P61201 443 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 DYNLT1P63172 113 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 FOXK2Q01167 660 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 PFKPQ01813 784 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 NR1H3Q13133 447 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 KLF1Q13351 362 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-215ENST00000550828 ZNF177Q13360 481 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-215ENST00000550828 CDH18Q13634 790 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 SIX1Q15475 284 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-215ENST00000550828 MLF2Q15773 248 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-215ENST00000550828 SLC44A4Q53GD3 710 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 RNF219Q5W0B1 726 aaPredicted RBP13.85□□□□□ -0.19
ERBB3-215ENST00000550828 FSTL4Q6MZW2 842 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 ARHGAP36Q6ZRI8 547 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 TPRG1Q6ZUI0 275 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 BBS12Q6ZW61 710 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 ADIPOR2Q86V24 386 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 RFX6Q8HWS3 928 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 MAP7D3Q8IWC1 876 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 UMODL1-AS1Q8N2C9 162 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 LRRN4Q8WUT4 740 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 HMCESQ96FZ2 354 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 MS4A14Q96JA4 679 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 OSBPL9Q96SU4 736 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 SLC2A11Q9BYW1 496 aa13.85□□□□□ -0.19
ERBB3-215ENST00000550828 SLC39A8Q9C0K1 460 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms