RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 UBE3AQ05086 875 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 ZNF699Q32M78 642 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 ZNF667Q5HYK9 610 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 LMBRD2Q68DH5 695 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 FAM109BQ6ICB4 259 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 PDXDC1Q6P996 788 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 DDX53Q86TM3 631 aaKnown RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 FMNL3Q8IVF7 1028 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 SLC39A11Q8N1S5 342 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 TMEM86AQ8N2M4 240 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 COLGALT1Q8NBJ5 622 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 APPL2Q8NEU8 664 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 LMO3Q8TAP4 145 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 UBXN4Q92575 508 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 MRFAP1L1Q96HT8 127 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 IGSF21Q96ID5 467 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 NT5C1BQ96P26 610 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 TGS1Q96RS0 853 aaKnown RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 SSBP3Q9BWW4 388 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 EDEM3Q9BZQ6 932 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 DNAI2Q9GZS0 605 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 INTS2Q9H0H0 1204 aaKnown RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 SLC28A3Q9HAS3 691 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 CYP3A43Q9HB55 503 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 GCNT4Q9P109 453 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 DNAJB4Q9UDY4 337 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 ADAM28Q9UKQ2 775 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 PDE4DIPQ5VU43 2346 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 ITIH6Q6UXX5 1313 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 LCHNA4D1U4 455 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 GRXCR1A8MXD5 290 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 SCDO00767 359 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 MATN3O15232 486 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 TACC1O75410 805 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 FGF18O76093 207 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 OAZ2O95190 189 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 C1RP00736 705 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 ODC1P11926 461 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 TYMPP19971 482 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 AOAHP28039 575 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PBX1P40424 430 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 MRE11P49959 708 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 GUCY2FP51841 1108 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 RABGGTBP53611 331 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 MFAP3P55082 362 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 YWHAEP62258 255 aaKnown RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PPP2CBP62714 309 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 TNNC1P63316 161 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PPP2CAP67775 309 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 NOP14P78316 857 aaKnown RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 TAP1Q03518 808 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 TRIM14Q14142 442 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 SYCP1Q15431 976 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 WDR72Q3MJ13 1102 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 TM4SF20Q53R12 229 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 SPOUT1Q5T280 376 aaKnown RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 SPECC1LQ69YQ0 1117 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 CD300LGQ6UXG3 332 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 RNF168Q8IYW5 571 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 SEMA4DQ92854 862 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 AJUBAQ96IF1 538 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 C8orf49Q96NF6 230 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 NAP1L5Q96NT1 182 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PAAF1Q9BRP4 392 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 NUP58Q9BVL2 599 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 XPO4Q9C0E2 1151 aaKnown RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 LMAN2LQ9H0V9 348 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 MMRN2Q9H8L6 949 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 MARCH5Q9NX47 278 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 IFNKQ9P0W0 207 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PPP4R1LQ9P1A2 415 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PUF60Q9UHX1 559 aaKnown RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 MYO6Q9UM54 1294 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 SSX2IPQ9Y2D8 614 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 SIK3Q9Y2K2 1263 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PRG3Q9Y2Y8 225 aaPredicted RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 ANK1P16157 1881 aa6.1□□□□□ -1.43
SCAF11-213ENST00000550629 PDCD11Q14690 1871 aaKnown RBP6.1□□□□□ -1.43
SCAF11-213ENST00000550629 CITO14578 2027 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 TRANK1O15050 2925 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 PTPRSQ13332 1948 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 FNDC1Q4ZHG4 1894 aaPredicted RBP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 OR6C75A6NL08 312 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 H3BNC9 293 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 H7C4K7 107 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 CYB561D2O14569 222 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 GABRDO14764 452 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 PPEF2O14830 753 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 ITGB1P05556 798 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 MYOGP15173 224 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 UCHL3P15374 230 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 TRIM21P19474 475 aaKnown RBP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 SLC9A1P19634 815 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 WARSP23381 471 aaKnown RBP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 PCSK1P29120 753 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 MC4RP32245 332 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 CTNNB1P35222 781 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms