RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 MID2Q9UJV3 735 aa17.24■□□□□ 0.35
ASIC1-206ENST00000550558 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
ASIC1-206ENST00000550558 XPO1O14980 1071 aaKnown RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 USP1O94782 785 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 LMNAP02545 664 aaKnown RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 EPHA3P29320 983 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 FBXO48Q5FWF7 155 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 TAS2R42Q7RTR8 314 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 PSTKQ8IV42 348 aaKnown RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 TDRD5Q8NAT2 981 aaKnown RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 PIWIL2Q8TC59 973 aaKnown RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 STK32AQ8WU08 396 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 DCLRE1BQ9H816 532 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 DMAP1Q9NPF5 467 aaPredicted RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 SNX15Q9NRS6 342 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 COL4A5P29400 1685 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 LRIG2O94898 1065 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 F9P00740 461 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 SERPINB8P50452 374 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 SLC20A2Q08357 652 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 SNX31Q8N9S9 440 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 GLT1D1Q96MS3 346 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 CATSPERBQ9H7T0 1116 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 TMEM216Q9P0N5 145 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 SLC12A4Q9UP95 1085 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 ATP6AP2A0A1C7CYW4 349 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 ATP6AP2O75787 350 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 PBX3P40426 434 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 PTDSS1P48651 473 aaKnown RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 KLC1Q07866 573 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 FAM110CQ1W6H9 321 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 PREPLQ4J6C6 727 aaPredicted RBP17.23■□□□□ 0.35
ASIC1-206ENST00000550558 CTXN3Q4LDR2 81 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 TAF2Q6P1X5 1199 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 ATAD1Q8NBU5 361 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 ACOT9Q9Y305 439 aa17.23■□□□□ 0.35
ASIC1-206ENST00000550558 FAM72CH0Y354 149 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 STMN1P16949 149 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 TWF1Q12792 350 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 FAM72AQ5TYM5 149 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 FAM171A1Q5VUB5 890 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 FAM72DQ6L9T8 149 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 FAM72BQ86X60 149 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 NMRAL1Q9HBL8 299 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 TAGLN3Q9UI15 199 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 CNTN6Q9UQ52 1028 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 TEX264Q9Y6I9 313 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 SBF2Q86WG5 1849 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 PIGNO95427 931 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 SERPINE1P05121 402 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 CHRNA4P43681 627 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 PAPOLAP51003 745 aaKnown RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 TPD52P55327 224 aaPredicted RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 MRPS6P82932 125 aaKnown RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 TMEM110Q86TL2 294 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 CDC26Q8NHZ8 85 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 NAT9Q9BTE0 207 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 SLC4A5Q9BY07 1137 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 CDY1Q9Y6F8 540 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 CLGNO14967 610 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 IGFBP6P24592 240 aaPredicted RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 ZNF792Q3KQV3 632 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 KHDC1Q4VXA5 237 aaKnown RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 C4orf22Q6V702 233 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 CAND1Q86VP6 1230 aaKnown RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 MTG1Q9BT17 334 aaPredicted RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 USP29Q9HBJ7 922 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 KCNH4Q9UQ05 1017 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 FARP1Q9Y4F1 1045 aaPredicted RBP17.22■□□□□ 0.35
ASIC1-206ENST00000550558 TRPV2Q9Y5S1 764 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
ASIC1-206ENST00000550558 KIAA0100Q14667 2235 aaKnown RBP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 SMIM35A0A1B0GVV1 85 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 BCLAF3A2AJT9 711 aaKnown RBP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 HNRNPLP14866 589 aaKnown RBP eCLIP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 FLT3LGP49771 235 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 CDH17Q12864 832 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 DNAL1Q4LDG9 190 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 NCBP2-AS2Q69YL0 99 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 CLEC20AQ6ZU45 233 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 RAB44Q7Z6P3 723 aaPredicted RBP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 ICA1LQ8NDH6 482 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 C10orf82Q8WW14 230 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 AFF4Q9UHB7 1163 aaKnown RBP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 C2P06681 752 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 CCNB1P14635 433 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 PPP1R15BQ5SWA1 713 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 IZUMO2Q6UXV1 221 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 RINLQ6ZS11 566 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 SCG3Q8WXD2 468 aaKnown RBP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 FCRL2Q96LA5 508 aaPredicted RBP17.21■□□□□ 0.35
ASIC1-206ENST00000550558 MGRN1O60291 552 aa17.21■□□□□ 0.35
ASIC1-206ENST00000550558 FBXO21O94952 628 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms