RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SLC4A5Q9BY07 1137 aa23.83■■□□□ 1.41
SMARCD1-209ENST00000550477 SLCO3A1Q9UIG8 710 aa23.83■■□□□ 1.41
SMARCD1-209ENST00000550477 PCDHGA1Q9Y5H4 931 aa23.83■■□□□ 1.41
SMARCD1-209ENST00000550477 URB1O60287 2271 aaKnown RBP23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 KCNU1A8MYU2 1149 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 THAP12O43422 761 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 MAGEC1O60732 1142 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 LDOC1O95751 146 aaPredicted RBP23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 CALCAP01258 141 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 C1SP09871 688 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 GNA15P30679 374 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 HNF1BP35680 557 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 CDK17Q00537 523 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 FAM46CQ5VWP2 391 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 PRPF39Q86UA1 669 aaKnown RBP23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 TRIM59Q8IWR1 403 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 SERAC1Q96JX3 654 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 FAM129BQ96TA1 746 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 SRRTQ9BXP5 876 aaKnown RBP23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 INTS2Q9H0H0 1204 aaKnown RBP23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 SCUBE2Q9NQ36 999 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 SERGEFQ9UGK8 458 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 CTNND2Q9UQB3 1225 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 ZFYVE26Q68DK2 2539 aa23.82■■□□□ 1.4
SMARCD1-209ENST00000550477 E5RJQ4 531 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 CCR1P32246 355 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 NUDT1P36639 197 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 CTSOP43234 321 aaPredicted RBP23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 MARSP56192 900 aaKnown RBP23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 CYP4F3Q08477 520 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 PAK1Q13153 545 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 COL28A1Q2UY09 1125 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 KCNT1Q5JUK3 1230 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 DENND1BQ6P3S1 775 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 PDZD3Q86UT5 571 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 APCDD1Q8J025 514 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 STK40Q8N2I9 435 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 HNRNPLLQ8WVV9 542 aaKnown RBP23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 PTPRN2Q92932 1015 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 MYEOVQ96EZ4 313 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 KREMEN1Q96MU8 473 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 SPAG5Q96R06 1193 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 KDM4CQ9H3R0 1056 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 FAM204AQ9H8W3 233 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 SLC25A13Q9UJS0 675 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 RAXQ9Y2V3 346 aa23.81■■□□□ 1.4
SMARCD1-209ENST00000550477 A0A1B0GVM2 712 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 TCAF2A6NFQ2 919 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 PPP1R3GB7ZBB8 358 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 ENC1O14682 589 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 GLI1P08151 1106 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 HOXB3P14651 431 aaPredicted RBP23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 JUPP14923 745 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 EFHC1Q5JVL4 640 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 DHRS13Q6UX07 377 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 OR8D1Q8WZ84 308 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 CNDP2Q96KP4 475 aaKnown RBP23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 NOX5Q96PH1 765 aa23.8■■□□□ 1.4
SMARCD1-209ENST00000550477 ZZEF1O43149 2961 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 SLC7A4O43246 635 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 PDGFRAP16234 1089 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 MZF1P28698 734 aaPredicted RBP23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 USP8P40818 1118 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 PLK1P53350 603 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 ADPRHP54922 357 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 STX17P56962 302 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 CCDC15Q0P6D6 951 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 ACCSLQ4AC99 568 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 GATAD2AQ86YP4 633 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 CREBRFQ8IUR6 639 aa23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 CCAR2Q8N163 923 aaKnown RBP23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 XPO7Q9UIA9 1087 aaKnown RBP23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 FARP1Q9Y4F1 1045 aaPredicted RBP23.79■■□□□ 1.4
SMARCD1-209ENST00000550477 DMXL2Q8TDJ6 3036 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 EIF4E1BA6NMX2 242 aaKnown RBP23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 C1QTNF3-AMACRE9PGA6 284 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 TLR4O00206 839 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 ZNF18P17022 549 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 ZNF177Q13360 481 aaPredicted RBP23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 MORC3Q14149 939 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 PRAMEF14Q5SWL7 426 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 C6orf118Q5T5N4 469 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 AADATQ8N5Z0 425 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 MFSD2AQ8NA29 543 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 RPRD1AQ96P16 312 aaPredicted RBP23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 ERVMER34-1Q9H9K5 563 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 ASNSD1Q9NWL6 643 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 DDIT4Q9NX09 232 aa23.78■■□□□ 1.4
SMARCD1-209ENST00000550477 PLXNA2O75051 1894 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 APC2O95996 2303 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 SYNJ2BP-COX16A0A087WUM0 186 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 FAM149AA5PLN7 773 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 HSF2BPO75031 334 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 RFPL3O75679 317 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 IGLV3-25P01717 112 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 WNT1P04628 370 aa23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 VASPP50552 380 aaPredicted RBP23.77■■□□□ 1.4
SMARCD1-209ENST00000550477 OVGP1Q12889 678 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms