RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 NLRP14Q86W24 1093 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 APCDD1Q8J025 514 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 AHI1Q8N157 1196 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 RNF10Q8N5U6 811 aaKnown RBP17.68■□□□□ 0.42
BRF1-217ENST00000550375 TMEM105Q8N8V8 129 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 LRRC57Q8N9N7 239 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 WFIKKN2Q8TEU8 576 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 SORCS1Q8WY21 1168 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 CLDN23Q96B33 292 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 CALN1Q9BXU9 219 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 MUC3BQ9H195 1237 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 CATSPERBQ9H7T0 1116 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 INTS6Q9UL03 887 aaKnown RBP17.68■□□□□ 0.42
BRF1-217ENST00000550375 CAPN6Q9Y6Q1 641 aa17.68■□□□□ 0.42
BRF1-217ENST00000550375 LRRD1A4D1F6 860 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 FGF10O15520 208 aaPredicted RBP17.67■□□□□ 0.42
BRF1-217ENST00000550375 GPR37L1O60883 481 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 KRT1P04264 644 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 POLR2EP19388 210 aaKnown RBP17.67■□□□□ 0.42
BRF1-217ENST00000550375 AMPD1P23109 780 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 HTR7P34969 479 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 ARSEP51690 589 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 OXCT1P55809 520 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 MMRN1Q13201 1228 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 DPYSL3Q14195 570 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 PLEKHG6Q3KR16 790 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 LRRC38Q5VT99 294 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 EGFLAMQ63HQ2 1017 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 KIAA0907Q7Z7F0 614 aaPredicted RBP17.67■□□□□ 0.42
BRF1-217ENST00000550375 SETD3Q86TU7 594 aaPredicted RBP17.67■□□□□ 0.42
BRF1-217ENST00000550375 RTL3Q8N8U3 475 aaKnown RBP17.67■□□□□ 0.42
BRF1-217ENST00000550375 RPLP0P6Q8NHW5 317 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 CYB5D2Q8WUJ1 264 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 RAPGEF5Q92565 580 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 ELOVL2Q9NXB9 296 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 HCN2Q9UL51 889 aa17.67■□□□□ 0.42
BRF1-217ENST00000550375 A0A0D9SEW6 157 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 PRR33A8MZF0 331 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 PSTPIP1O43586 416 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 FTCDO95954 541 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ERCC2P18074 760 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 KDELR1P24390 212 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 KIR2DL1P43626 348 aaPredicted RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 MARCKSL1P49006 195 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 HCAR3P49019 387 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 MAPKAPK2P49137 400 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ZNF135P52742 658 aaPredicted RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 PDK2Q15119 407 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ODF2Q5BJF6 829 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 PKN3Q6P5Z2 889 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ZNF662Q6ZS27 426 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 PEX26Q7Z412 305 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 SYCE1Q8N0S2 351 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 SYNPOQ8N3V7 929 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 CCDC33Q8N5R6 958 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ALLCQ8N6M5 410 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ZNF513Q8N8E2 541 aaPredicted RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 OR7D4Q8NG98 312 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 FAM71BQ8TC56 605 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 USP33Q8TEY7 942 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 UCMAQ8WVF2 138 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 TSC1Q92574 1164 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 KRT35Q92764 455 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 RNF25Q96BH1 459 aaPredicted RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 FAM122AQ96E09 287 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 CSPG4P5Q96PW8 444 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 FEM1AQ9BSK4 669 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 SPON2Q9BUD6 331 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 TRMT1Q9NXH9 659 aaKnown RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 VPS28Q9UK41 221 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 PYCARDQ9ULZ3 195 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 MFHAS1Q9Y4C4 1052 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 CHD5Q8TDI0 1954 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ILVBLA1L0T0 632 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 KLF8O95600 359 aaPredicted RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 IL4RP24394 825 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 WASP42768 502 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 CTSOP43234 321 aaPredicted RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 RPS9P46781 194 aaKnown RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 GNA12Q03113 381 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 SLC12A1Q13621 1099 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 DPYSQ14117 519 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 GAS6Q14393 721 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 DMC1Q14565 340 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 EIF4HQ15056 248 aaKnown RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 MAP7D3Q8IWC1 876 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 KMT2EQ8IZD2 1858 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 NETO2Q8NC67 525 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ALG14Q96F25 216 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ACOX2Q99424 681 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 RETREG1Q9H6L5 497 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 ETNK2Q9NVF9 386 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 POLR3BQ9NW08 1133 aaPredicted RBP17.66■□□□□ 0.42
BRF1-217ENST00000550375 DLGAP2Q9P1A6 1054 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 AMFRQ9UKV5 643 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
BRF1-217ENST00000550375 STARD13Q9Y3M8 1113 aa17.66■□□□□ 0.42
BRF1-217ENST00000550375 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms