RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 TMEM74BQ9NUR3 256 aa10.77□□□□□ -0.69
CCDC38-207ENST00000549752 COX16Q9P0S2 106 aa10.77□□□□□ -0.69
CCDC38-207ENST00000549752 AJAP1Q9UKB5 411 aaPredicted RBP10.77□□□□□ -0.69
CCDC38-207ENST00000549752 ACACBO00763 2458 aa10.77□□□□□ -0.69
CCDC38-207ENST00000549752 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 EDDM13A0A1B0GTR0 161 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 METTL12A8MUP2 240 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 UPK3BL1B0FP48 263 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 UPK3BL2E5RIL1 263 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 CDX4O14627 284 aaPredicted RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 OPHN1O60890 802 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 CLDN11O75508 207 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 KCNK5O95279 499 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 CCDC172P0C7W6 258 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 HLA-EP13747 358 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 NOVA1P51513 510 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 RNASE9P60153 205 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 DEUP1Q05D60 604 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 SLC14A1Q13336 389 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 ZNF177Q13360 481 aaPredicted RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 HNRNPDQ14103 355 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 TAF5Q15542 800 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 HNRNPA1L2Q32P51 320 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 UAP1L1Q3KQV9 507 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 FAM102AQ5T9C2 384 aaPredicted RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 DPY19L2P1Q6NXN4 242 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 LRRC31Q6UY01 552 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 USP30Q70CQ3 517 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 ARCQ7LC44 396 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 DSG4Q86SJ6 1040 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 RETREG3Q86VR2 466 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 CCAR2Q8N163 923 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 DEFB119Q8N690 84 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 NEK11Q8NG66 645 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 WFDC5Q8TCV5 224 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 EPS8L1Q8TE68 723 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 PGAP3Q96FM1 320 aaPredicted RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 LMLNQ96KR4 655 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 RPRD1AQ96P16 312 aaPredicted RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 NPY6RQ99463 290 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 PRMT1Q99873 361 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 GTPBP2Q9BX10 602 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 BTBD1Q9H0C5 482 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 SGK2Q9HBY8 427 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 PRSS16Q9NQE7 514 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 FANCLQ9NW38 375 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 SLC25A13Q9UJS0 675 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 TPX2Q9ULW0 747 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 ERVW-1Q9UQF0 538 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 VPS9D1Q9Y2B5 631 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 ITIH6Q6UXX5 1313 aa10.76□□□□□ -0.69
CCDC38-207ENST00000549752 ATXN2Q99700 1313 aaKnown RBP10.76□□□□□ -0.69
CCDC38-207ENST00000549752 TRPM6Q9BX84 2022 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 PNMA6AP0CW24 399 aaPredicted RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 RDXP35241 583 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 SOX5P35711 763 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 STAT1P42224 750 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 MAPK8P45983 427 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 CXCR3P49682 368 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 SULT1E1P49888 294 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 PLK1P53350 603 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 COPB1P53618 953 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 CDH4P55283 916 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 RPS14P62263 151 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 CDR2Q01850 454 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 ELAVL3Q14576 367 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 SLC25A52Q3SY17 297 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 FSCBQ5H9T9 825 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 DCAF12L1Q5VU92 463 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 TAF3Q5VWG9 929 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 PSAPL1Q6NUJ1 521 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 FBXL22Q6P050 247 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 IL27RAQ6UWB1 636 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 ZNF366Q8N895 744 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 GANCQ8TET4 914 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 RSPH9Q9H1X1 276 aaPredicted RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 GANQ9H2C0 597 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 FAM207AQ9NSI2 230 aaPredicted RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 LIMA1Q9UHB6 759 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 XPO7Q9UIA9 1087 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 INTS6Q9UL03 887 aaKnown RBP10.75□□□□□ -0.69
CCDC38-207ENST00000549752 VANGL2Q9ULK5 521 aa10.75□□□□□ -0.69
CCDC38-207ENST00000549752 LRRC72A6NJI9 287 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 SMTNL1A8MU46 457 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 LGALS16A8MUM7 142 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 CFAP99D6REC4 459 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 BCAT2O15382 392 aaPredicted RBP10.74□□□□□ -0.69
CCDC38-207ENST00000549752 SIN3BO75182 1162 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 PAGE1O75459 146 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 GFPT2O94808 682 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 SEMA4FO95754 770 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 CER1O95813 267 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 ADH1BP00325 375 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 MMEP08473 750 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 DESP17661 470 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 NOMO3P69849 1222 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 PITX1P78337 314 aaPredicted RBP10.74□□□□□ -0.69
CCDC38-207ENST00000549752 KRT83P78385 493 aa10.74□□□□□ -0.69
CCDC38-207ENST00000549752 UBXN1Q04323 297 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms