RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CDC26Q8NHZ8 85 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 RCN3Q96D15 328 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 MCRS1Q96EZ8 462 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 NT5MQ9NPB1 228 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ARHGEF4Q9NR80 690 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 MEIS3P2A8K0S8 358 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 C9IYK1 514 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 AKAP10O43572 662 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 TCEA3O75764 348 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 C22orf31O95567 290 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ATICP31939 592 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 GJA9P57773 515 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 STX1BP61266 288 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ZNF778Q96MU6 729 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 KLHL5Q96PQ7 755 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 LENG8Q96PV6 779 aaPredicted RBP14.48□□□□□ -0.09
CACNB3-209ENST00000548860 SERPINI1Q99574 410 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 DCDC2Q9UHG0 476 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 SMIM28A0A1B0GU29 152 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 MYBPHLA2RUH7 354 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 YJEFN3A6XGL0 299 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 E7ENQ6 273 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 PFDN1O60925 122 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 SIN3BO75182 1162 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 BEST1O76090 585 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 GFAPP14136 432 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 ABCE1P61221 599 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 MPP1Q00013 466 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 SEL1L3Q68CR1 1132 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 PDZD8Q8NEN9 1154 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CAMKK2Q96RR4 588 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CENPKQ9BS16 269 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 USP29Q9HBJ7 922 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 PCDHA11Q9Y5I1 949 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 GAS2O43903 313 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CCNB1P14635 433 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 IGFBP6P24592 240 aaPredicted RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 L1CAMP32004 1257 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 PAPOLAP51003 745 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 ZNF132P52740 706 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 TSTA3Q13630 321 aaPredicted RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 TARBP2Q15633 366 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 ASRGL1Q7L266 308 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 TMC7Q7Z402 723 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 AMIGO2Q86SJ2 522 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 TDRPQ86YL5 185 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 URGCPQ8TCY9 931 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 SNRNP27Q8WVK2 155 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 SENP8Q96LD8 212 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 DSEQ9UL01 958 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CDY2AQ9Y6F7 541 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CDY1Q9Y6F8 540 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 ERI2A8K979 691 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 MDM4O15151 490 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 TRIM13O60858 407 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 LTFP02788 710 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 PTPN1P18031 435 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CXCL17Q6UXB2 119 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 NAT14Q8WUY8 206 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 RMDN1Q96DB5 314 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 CCDC97Q96F63 343 aaPredicted RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 PRPF18Q99633 342 aaKnown RBP14.47□□□□□ -0.09
CACNB3-209ENST00000548860 EBF3Q9H4W6 596 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 EPS15L1Q9UBC2 864 aa14.47□□□□□ -0.09
CACNB3-209ENST00000548860 MAGEA13PA6NCF6 341 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 FAM72CH0Y354 149 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 VAV1P15498 845 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 GRIA4P48058 902 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 RALGDSQ12967 914 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 BLMHQ13867 455 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 KCNJ11Q14654 390 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 FAM72AQ5TYM5 149 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 FAM72DQ6L9T8 149 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 FAM72BQ86X60 149 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 FAM193BQ96PV7 902 aaPredicted RBP14.46□□□□□ -0.09
CACNB3-209ENST00000548860 STYXL1Q9Y6J8 313 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 PGK1P00558 417 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 MT-ND1P03886 318 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 SKIV2L2P42285 1042 aaKnown RBP14.46□□□□□ -0.09
CACNB3-209ENST00000548860 MAP3K21Q5TCX8 1036 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 C9orf57Q5W0N0 161 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 ANKRD52Q8NB46 1076 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 VPS39Q96JC1 886 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 PHF12Q96QT6 1004 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 OR52B2Q96RD2 323 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 SP110Q9HB58 689 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 RREB1Q92766 1687 aa14.46□□□□□ -0.09
CACNB3-209ENST00000548860 HNRNPCL1O60812 293 aaKnown RBP14.46□□□□□ -0.1
CACNB3-209ENST00000548860 RFPL1O75677 317 aa14.46□□□□□ -0.1
CACNB3-209ENST00000548860 ACADSP16219 412 aa14.46□□□□□ -0.1
CACNB3-209ENST00000548860 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.1
CACNB3-209ENST00000548860 NMBRP28336 390 aa14.46□□□□□ -0.1
CACNB3-209ENST00000548860 FDFT1P37268 417 aa14.46□□□□□ -0.1
CACNB3-209ENST00000548860 TRMT5Q32P41 509 aaKnown RBP14.46□□□□□ -0.1
CACNB3-209ENST00000548860 SLC9B1Q4ZJI4 515 aa14.46□□□□□ -0.1
CACNB3-209ENST00000548860 FAM219BQ5XKK7 198 aa14.46□□□□□ -0.1
CACNB3-209ENST00000548860 DRICH1Q6PGQ1 229 aaPredicted RBP14.46□□□□□ -0.1
CACNB3-209ENST00000548860 EXOC2Q96KP1 924 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms