RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 EPC1Q9H2F5 836 aa17.9■□□□□ 0.46
HDAC7-227ENST00000548080 DHX35Q9H5Z1 703 aaKnown RBP17.9■□□□□ 0.46
HDAC7-227ENST00000548080 PCDH18Q9HCL0 1135 aa17.9■□□□□ 0.46
HDAC7-227ENST00000548080 ANLNQ9NQW6 1124 aa17.9■□□□□ 0.46
HDAC7-227ENST00000548080 DNAJC17Q9NVM6 304 aaKnown RBP17.9■□□□□ 0.46
HDAC7-227ENST00000548080 DLGAP2Q9P1A6 1054 aa17.9■□□□□ 0.46
HDAC7-227ENST00000548080 RAPGEFL1Q9UHV5 662 aa17.9■□□□□ 0.46
HDAC7-227ENST00000548080 CLEC4EQ9ULY5 219 aa17.9■□□□□ 0.46
HDAC7-227ENST00000548080 SNX10Q9Y5X0 201 aa17.9■□□□□ 0.46
HDAC7-227ENST00000548080 TULP3O75386 442 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 CHRNB1P11230 501 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 L1CAMP32004 1257 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 CHRNA3P32297 505 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 ADRA1BP35368 520 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 CHKAP35790 457 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 SLC11A2P49281 568 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 SEC13P55735 322 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 DPYSL2Q16555 572 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 ADGRF1Q5T601 910 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 FYB2Q5VWT5 728 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 ETFBKMTQ8IXQ9 262 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 FAM217AQ8IXS0 508 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 C12orf50Q8NA57 414 aaPredicted RBP17.89■□□□□ 0.45
HDAC7-227ENST00000548080 CCDC26Q8TAB7 109 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 DDI1Q8WTU0 396 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 MAK16Q9BXY0 300 aaKnown RBP17.89■□□□□ 0.45
HDAC7-227ENST00000548080 ANKZF1Q9H8Y5 726 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 ZDHHC4Q9NPG8 344 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 HOMER3Q9NSC5 361 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 POLR3BQ9NW08 1133 aaPredicted RBP17.89■□□□□ 0.45
HDAC7-227ENST00000548080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC7-227ENST00000548080 STIM2Q9P246 746 aa17.89■□□□□ 0.45
HDAC7-227ENST00000548080 TARSL2A2RTX5 802 aaKnown RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 ZNF487B1APH4 448 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 I6L893 689 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 CCR1P32246 355 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 GRSF1Q12849 480 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 ARL13BQ3SXY8 428 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 EFHC2Q5JST6 749 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 PIK3R6Q5UE93 754 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 PKN3Q6P5Z2 889 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 BBS12Q6ZW61 710 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 CHSY1Q86X52 802 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 RFX6Q8HWS3 928 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 LGI2Q8N0V4 545 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 CFAP52Q8N1V2 620 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 CPXM2Q8N436 756 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 ATP6V0D2Q8N8Y2 350 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 C1orf54Q8WWF1 131 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 PRICKLE1Q96MT3 831 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 KCTD15Q96SI1 283 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 WDCPQ9H6R7 721 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 LRRC19Q9H756 370 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 ARHGEF4Q9NR80 690 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 MARK1Q9P0L2 795 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 STOML2Q9UJZ1 356 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 KCNU1A8MYU2 1149 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 TBL1XO60907 577 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 LATS1O95835 1130 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 PENKP01210 267 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 TACR2P21452 398 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 IL4RP24394 825 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 COILP38432 576 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 ADCY2Q08462 1091 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 SCAPQ12770 1279 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 MMRN1Q13201 1228 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 CCINQ13939 588 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 TFDP2Q14188 446 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 GAS6Q14393 721 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 CCNG2Q16589 344 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 PPP6R3Q5H9R7 873 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 MAATS1Q7Z4T9 603 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 CIR1Q86X95 450 aaPredicted RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 PHTF2Q8N3S3 785 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 BTN2A3PQ96KV6 586 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 RUNDC3BQ96NL0 473 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 RNF157Q96PX1 679 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 PNKPQ96T60 521 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 NELL2Q99435 816 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 ZNF670Q9BS34 389 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 MAGEB5Q9BZ81 275 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 TKTL2Q9H0I9 626 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 SIK2Q9H0K1 926 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 C2orf42Q9NWW7 574 aa17.88■□□□□ 0.45
HDAC7-227ENST00000548080 R3HDM2Q9Y2K5 976 aaKnown RBP17.88■□□□□ 0.45
HDAC7-227ENST00000548080 GFRA2O00451 464 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 RAD51CO43502 376 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 CACNG3O60359 315 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 CST8O60676 142 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 RNF40O75150 1001 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 PAGE1O75459 146 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 KAT7O95251 611 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 CYBBP04839 570 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 TUBBP07437 444 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 HOXD9P28356 352 aaPredicted RBP17.87■□□□□ 0.45
HDAC7-227ENST00000548080 HOXC13P31276 330 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 FNTAP49354 379 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 RPS24P62847 133 aaKnown RBP17.87■□□□□ 0.45
HDAC7-227ENST00000548080 MRPS25P82663 173 aaKnown RBP17.87■□□□□ 0.45
HDAC7-227ENST00000548080 ANKRD20A8PQ5CZ79 823 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms