RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZDHHC14Q8IZN3 488 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 CPA6Q8N4T0 437 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 MMGT1Q8N4V1 131 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 ATL2Q8NHH9 583 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 MAFAQ8NHW3 353 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 SLC35B2Q8TB61 432 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 OLFM3Q96PB7 478 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 LRRC3BQ96PB8 259 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 TRMT61BQ9BVS5 477 aaKnown RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 BBS2Q9BXC9 721 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 LINC00597Q9H2U6 94 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 ZNF212Q9UDV6 495 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 ZNF148Q9UQR1 794 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 R3HDM2Q9Y2K5 976 aaKnown RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 KIF26AQ9ULI4 1882 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 GAS8O95995 478 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 ITGAVP06756 1048 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 RHOCP08134 193 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 HOXD9P28356 352 aaPredicted RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 STIP1P31948 543 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 COILP38432 576 aaPredicted RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 IRAK1P51617 712 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 SGSHP51688 502 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 GNA12Q03113 381 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 C2orf54Q08AI8 447 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 GALNT2Q10471 571 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 SLC10A2Q12908 348 aaPredicted RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 SLC12A1Q13621 1099 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 HTR4Q13639 388 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 DHX34Q14147 1143 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 DHCR24Q15392 516 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 AAK1Q2M2I8 961 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 ANO4Q32M45 955 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 GLE1Q53GS7 698 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 LY6G5CQ5SRR4 150 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 FYB2Q5VWT5 728 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 PTCRAQ6ISU1 281 aaPredicted RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 TIGD7Q6NT04 549 aaPredicted RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 DARS2Q6PI48 645 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 PARM1Q6UWI2 310 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 NPNTQ6UXI9 565 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 ZC3H18Q86VM9 953 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 CIR1Q86X95 450 aaPredicted RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 TMEM25Q86YD3 366 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 CARNMT1Q8N4J0 409 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 ATPAF2Q8N5M1 289 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 NPWQ8N729 165 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 FIBINQ8TAL6 211 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 TFB1MQ8WVM0 346 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 ATG4AQ8WYN0 398 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 FGF14Q92915 247 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 HDAC11Q96DB2 347 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 MYEOVQ96EZ4 313 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 KXD1Q9BQD3 176 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 FAM83CQ9BQN1 747 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 KLC2Q9H0B6 622 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 IGSF9Q9P2J2 1179 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 SAE1Q9UBE0 346 aaPredicted RBP16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 PCYOX1Q9UHG3 505 aa16.24■□□□□ 0.19
TRAFD1-203ENST00000547063 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 EFCAB8A8MWE9 144 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 RASA4BC9J798 803 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 NEDD8-MDP1E9PL57 170 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 DFFAO00273 331 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 HOXC11O43248 304 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 RASA4O43374 803 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 STK10O94804 968 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 ADH5P11766 374 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 GARSP41250 739 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 SNX1Q13596 522 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 OASLQ15646 514 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 SLC45A4Q5BKX6 768 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 RHBDF2Q6PJF5 856 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 SYDE1Q6ZW31 735 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 CCNYQ8ND76 341 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 RSAD2Q8WXG1 361 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 SLCO2A1Q92959 643 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 CELF6Q96J87 481 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 CCDC114Q96M63 670 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 TSGA13Q96PP4 275 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 QKIQ96PU8 341 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 KRT12Q99456 494 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 DDX47Q9H0S4 455 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 HPCAL4Q9UM19 191 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 MFHAS1Q9Y4C4 1052 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 NUMBLQ9Y6R0 609 aa16.23■□□□□ 0.19
TRAFD1-203ENST00000547063 CDH23Q9H251 3354 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 C2CD4DB7Z1M9 353 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 ECEL1O95672 775 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 CYP17A1P05093 508 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 TYRP14679 529 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 CCNCP24863 283 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 ACTN2P35609 894 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 DR1Q01658 176 aa16.22■□□□□ 0.19
TRAFD1-203ENST00000547063 PPIDQ08752 370 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms