RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 SLC5A2P31639 672 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 METAP1P53582 386 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 SNRPFP62306 86 aaKnown RBP11.18□□□□□ -0.62
TMEM116-203ENST00000546537 CLDN10P78369 228 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 INCA1Q0VD86 236 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 ELAVL3Q14576 367 aaKnown RBP11.18□□□□□ -0.62
TMEM116-203ENST00000546537 CLCA4Q14CN2 919 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 CDKN3Q16667 212 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 RAB41Q5JT25 222 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 ZCCHC8Q6NZY4 707 aaKnown RBP11.18□□□□□ -0.62
TMEM116-203ENST00000546537 GUSBP11Q6P575 273 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 EPM2AIP1Q7L775 607 aaPredicted RBP11.18□□□□□ -0.62
TMEM116-203ENST00000546537 EFL1Q7Z2Z2 1120 aaKnown RBP11.18□□□□□ -0.62
TMEM116-203ENST00000546537 C14orf80Q86SX3 495 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 MFN1Q8IWA4 741 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 ZNF564Q8TBZ8 553 aaPredicted RBP11.18□□□□□ -0.62
TMEM116-203ENST00000546537 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 OLA1Q9NTK5 396 aaKnown RBP11.18□□□□□ -0.62
TMEM116-203ENST00000546537 SFMBT1Q9UHJ3 866 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 SLCO3A1Q9UIG8 710 aa11.18□□□□□ -0.62
TMEM116-203ENST00000546537 ZFC3H1O60293 1989 aaKnown RBP11.17□□□□□ -0.62
TMEM116-203ENST00000546537 CPED1A4D0V7 1026 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 LRRIQ3A6PVS8 624 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-203ENST00000546537 IRAK2O43187 625 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 LIPCP11150 499 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 CTSOP43234 321 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-203ENST00000546537 PDX1P52945 283 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 SKIDA1Q1XH10 827 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-203ENST00000546537 HIST2H2BCQ6DN03 193 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 PM20D1Q6GTS8 502 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 RFWD3Q6PCD5 774 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 PTRH1Q86Y79 214 aaKnown RBP11.17□□□□□ -0.62
TMEM116-203ENST00000546537 OR13H1Q8NG92 308 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 PARD3BQ8TEW8 1205 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 TAF4BQ92750 862 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 LIN37Q96GY3 246 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-203ENST00000546537 CALN1Q9BXU9 219 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 UBXN6Q9BZV1 441 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 ADNPQ9H2P0 1102 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 NCKIPSDQ9NZQ3 722 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 LRRK1Q38SD2 2015 aa11.17□□□□□ -0.62
TMEM116-203ENST00000546537 ICE1Q9Y2F5 2266 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 GOLGA6L7A0A1B0GV03 622 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 H3BQV1 296 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 PLD2O14939 933 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 ASS1P00966 412 aaKnown RBP11.16□□□□□ -0.62
TMEM116-203ENST00000546537 RPN1P04843 607 aaKnown RBP11.16□□□□□ -0.62
TMEM116-203ENST00000546537 SLC6A4P31645 630 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 CASRP41180 1078 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 HNRNPKP61978 463 aaKnown RBP eCLIP11.16□□□□□ -0.62
TMEM116-203ENST00000546537 MORC3Q14149 939 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 FAM133BQ5BKY9 247 aaKnown RBP11.16□□□□□ -0.62
TMEM116-203ENST00000546537 PITRM1Q5JRX3 1037 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 PERM1Q5SV97 790 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 AGBL4Q5VU57 503 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 SPOPLQ6IQ16 392 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 CRTC1Q6UUV9 634 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 CCDC73Q6ZRK6 1079 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 PIGZQ86VD9 579 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 C12orf56Q8IXR9 622 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 SLC22A18ASQ8N1D0 253 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 WDR48Q8TAF3 677 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 HTR3CQ8WXA8 447 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 MYOCQ99972 504 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 FUCA2Q9BTY2 467 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 STIM2Q9P246 746 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 SALL4Q9UJQ4 1053 aa11.16□□□□□ -0.62
TMEM116-203ENST00000546537 SPENQ96T58 3664 aaKnown RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 NBASA2RRP1 2371 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 CASC3O15234 703 aaKnown RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 SLC31A1O15431 190 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 MSI1O43347 362 aaKnown RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 KRT38O76015 456 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 ZBED1O96006 694 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 VAV1P15498 845 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 TXLNAP40222 546 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 STAT6P42226 847 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 TKTL1P51854 596 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 CYP4F2P78329 520 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 ECT2LQ008S8 904 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 CNTN1Q12860 1018 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 EIF3IQ13347 325 aaKnown RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 ZACNQ401N2 412 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 ZNF542PQ5EBM4 170 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 FSCBQ5H9T9 825 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 MANEAQ5SRI9 462 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 MMS22LQ6ZRQ5 1243 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 ZNF548Q8NEK5 533 aaPredicted RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 RNF139Q8WU17 664 aa11.15□□□□□ -0.62
TMEM116-203ENST00000546537 NDRG1Q92597 394 aaKnown RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 RPL10LQ96L21 214 aaKnown RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 PRICKLE1Q96MT3 831 aaPredicted RBP11.15□□□□□ -0.62
TMEM116-203ENST00000546537 NOX5Q96PH1 765 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms