RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 BORAQ6PGQ7 559 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 C16orf89Q6UX73 402 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 IZUMO2Q6UXV1 221 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 UNC5AQ6ZN44 842 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PDZD4Q76G19 769 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PRICKLE2Q7Z3G6 844 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 TMEM110Q86TL2 294 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 UNC93AQ86WB7 457 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RASSF3Q86WH2 238 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RIOX2Q8IUF8 465 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 APOBEC3FQ8IUX4 373 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 IGDCC3Q8IVU1 814 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 KIAA0319LQ8IZA0 1049 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 JOSD2Q8TAC2 188 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 TRPC4APQ8TEL6 797 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 DEPDC1BQ8WUY9 529 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 WDR60Q8WVS4 1066 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PRPF31Q8WWY3 499 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RXFP2Q8WXD0 754 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 HSPH1Q92598 858 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CENPIQ92674 756 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CFAP36Q96G28 342 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CNDP1Q96KN2 507 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PPP1R2P1Q96PQ5 205 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PANX3Q96QZ0 392 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CPNE1Q99829 537 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 THTPAQ9BU02 230 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 SPATA16Q9BXB7 569 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 NT5C1AQ9BXI3 368 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PLEKHA5Q9HAU0 1116 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 GBA2Q9HCG7 927 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PCDH18Q9HCL0 1135 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CNOT11Q9UKZ1 510 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RAB26Q9ULW5 256 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PCDHGB7Q9Y5F8 929 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MAD1L1Q9Y6D9 718 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 ZNFX1Q9P2E3 1918 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 A0A088AWK7 358 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 A0A0A0MRY4 1105 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 M0QYV0 167 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 GPR25O00155 361 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 NCAM2O15394 837 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 PSMD3O43242 534 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 BANF1O75531 89 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SKAP2O75563 359 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 APRTP07741 180 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 COL1A2P08123 1366 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 THRAP10827 490 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 EPB42P16452 691 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 PTPRAP18433 802 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 UBA1P22314 1058 aaKnown RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SPRP35270 261 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SERPINB5P36952 375 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 GP5P40197 560 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SLC1A6P48664 564 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 RPL34P49207 117 aaKnown RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 GLUD2P49448 558 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 RPS6KA3P51812 740 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 CSE1LP55060 971 aaKnown RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 CDC42EP1Q00587 391 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SLC6A3Q01959 620 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 KCTD19Q17RG1 926 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SMTNL2Q2TAL5 461 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ANKRD20A4Q4UJ75 823 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 FASTKD1Q53R41 847 aaKnown RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF484Q5JVG2 852 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 HP1BP3Q5SSJ5 553 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ZBTB41Q5SVQ8 909 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 TEDDM1Q5T9Z0 273 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SAMD5Q5TGI4 173 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 RASIP1Q5U651 963 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 KIAA0319Q5VV43 1072 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ARHGAP17Q68EM7 881 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 NXPE4Q6UWF7 544 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 LBX2Q6XYB7 198 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 LRRC69Q6ZNQ3 347 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 CYP4V2Q6ZWL3 525 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SLC26A9Q7LBE3 791 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 STRADAQ7RTN6 431 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 LYSMD3Q7Z3D4 306 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ALYREFQ86V81 257 aaKnown RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 UNC5BQ8IZJ1 945 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 MARVELD2Q8N4S9 558 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 LRRC52Q8N7C0 313 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ICA1LQ8NDH6 482 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 ADCY4Q8NFM4 1077 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 RIN3Q8TB24 985 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 TOP1MTQ969P6 601 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 PMEPA1Q969W9 287 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 DGCR14Q96DF8 476 aaKnown RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SPATA13Q96N96 652 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 GORASP1Q9BQQ3 440 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 COL25A1Q9BXS0 654 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-225ENST00000545920 CRISPLD1Q9H336 500 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SMARCAD1Q9H4L7 1026 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 SUV39H2Q9H5I1 410 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 PTTG2Q9NZH5 202 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 TXNDC16Q9P2K2 825 aa6.63□□□□□ -1.35
SNHG1-225ENST00000545920 HESX1Q9UBX0 185 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms