RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TMEM245Q9H330 911 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 PARVBQ9HBI1 364 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 WFS1O76024 890 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 CCDC130P13994 396 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 SLC2A4P14672 509 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 PTPN1P18031 435 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 MMP13P45452 471 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 TMED10P49755 219 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 EIF2B5Q13144 721 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 RIPOR1Q6ZS17 1223 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 SNX32Q86XE0 403 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 APBA2Q99767 749 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 TKTL2Q9H0I9 626 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 UTP6Q9NYH9 597 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 CDH9Q9ULB4 789 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 TGFB1I1O43294 461 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 CNOT3O75175 753 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 KATNA1O75449 491 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 PDE5AO76074 875 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 TPH1P17752 444 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ATP4AP20648 1035 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 GRK3P35626 688 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 SQLEQ14534 574 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 PACS2Q86VP3 889 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 FAM45AQ8TCE6 357 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 MYRFQ9Y2G1 1151 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 UBR1Q8IWV7 1749 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 A0A0U1RQJ8 604 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ALOX15BO15296 676 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 RGS14O43566 566 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 CKMP06732 381 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 LTA4HP09960 611 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ETS1P14921 441 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 NPR3P17342 541 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 NME5P56597 212 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 AADATQ8N5Z0 425 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 CEP44Q9C0F1 390 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ATP13A1Q9HD20 1204 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 PALMDQ9NP74 551 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 COL1A2P08123 1366 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ZNF839A8K0R7 811 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 CNTN2Q02246 1040 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 GLT6D1Q7Z4J2 308 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ANKRD52Q8NB46 1076 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 NFAT5O94916 1531 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 PLSCR1O15162 318 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ZNF862O60290 1169 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 RNASEH1O60930 286 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 CBX6O95503 412 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 TFRCP02786 760 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 OR56A5P0C7T3 313 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ACAT1P24752 427 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 CERS2Q96G23 380 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 MAGEB10Q96LZ2 347 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ULBP1Q9BZM6 244 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 COPS7BQ9H9Q2 264 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 RAD18Q9NS91 495 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 UBA2Q9UBT2 640 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 CD3EAPO15446 510 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 HALP42357 657 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 VAC14Q08AM6 782 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 AADACL2Q6P093 401 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ACOX2Q99424 681 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 COPG1Q9Y678 874 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 C2CD2LO14523 706 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 RECQL4O94761 1208 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 IGSF6O95976 241 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 CYP2A6P11509 494 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 TUFMP49411 452 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 NEK3P51956 506 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 DDX39BQ13838 428 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 CAPSQ13938 189 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 TMEM132CQ8N3T6 1108 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 NKAPQ8N5F7 415 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 AKT1S1Q96B36 256 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ADAM30Q9UKF2 790 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ZNF682O95780 498 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 PLEKHM3Q6ZWE6 761 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 LRRC52Q8N7C0 313 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 TRAPPC12Q8WVT3 735 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 GLMNQ92990 594 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 PHF21BQ96EK2 531 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 APOL4Q9BPW4 351 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 SNRNP25Q9BV90 132 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 CATSPERZQ9NTU4 200 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 MEI4A8MW99 385 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 PRR23D1E9PI22 279 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 CCNT2O60583 730 aaKnown RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 GUCA1CO95843 209 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ZSCAN5DPP0CG00 497 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 PRR23D2P0DMB1 279 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 PSEN1P49768 467 aa12.74□□□□□ -0.37
COL4A6-209ENST00000545689 USP50Q70EL3 339 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
COL4A6-209ENST00000545689 ST6GALNAC4Q9H4F1 302 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms