RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CAPN11Q9UMQ6 739 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 LUC7L2Q9Y383 392 aaKnown RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 SNX10Q9Y5X0 201 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 IGLV3-10A0A075B6K4 115 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 TCRBV5S1A1TA0A578 114 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 TARSL2A2RTX5 802 aaKnown RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 RNASEH1O60930 286 aaKnown RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 CNTN5O94779 1100 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 FTLP02792 175 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 CTSOP43234 321 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 TPMTP51580 245 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 HDAC4P56524 1084 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 RPL7AP62424 266 aaKnown RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 ARID5BQ14865 1188 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 ALFQ53S48 1182 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 TDRD12Q587J7 1177 aaKnown RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 C6orf118Q5T5N4 469 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 LYSMD4Q5XG99 296 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 ARMCX6Q7L4S7 300 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 CACUL1Q86Y37 369 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF683Q8IZ20 524 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 PIGKQ92643 395 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 MYO19Q96H55 970 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 MRGPRX3Q96LB0 322 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 CNPY3Q9BT09 278 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 ZYG11BQ9C0D3 744 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 XPO4Q9C0E2 1151 aaKnown RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 USP36Q9P275 1121 aaKnown RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 OR12D3Q9UGF7 316 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 SLC25A13Q9UJS0 675 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.17■□□□□ 0.18
CCDC78-216ENST00000544996 GVINP1Q7Z2Y8 2422 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 ITIH6Q6UXX5 1313 aa16.17■□□□□ 0.18
CCDC78-216ENST00000544996 MYO18AQ92614 2054 aaKnown RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 EDDM13A0A1B0GTR0 161 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 RTN2O75298 545 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 DNTTP04053 509 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 SERPING1P05155 500 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 RHOCP08134 193 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 OR1E1P30953 314 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 PTGER3P43115 390 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 ID4P47928 161 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 KRT83P78385 493 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 SFSWAPQ12872 951 aaKnown RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 MAMLD1Q13495 774 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 SF3A2Q15428 464 aaKnown RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 TTC31Q49AM3 519 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 AASDHQ4L235 1098 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 PPP1R15BQ5SWA1 713 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF776Q68DI1 518 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 TFAP2DQ7Z6R9 452 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 SYT12Q8IV01 421 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 DEFB119Q8N690 84 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 FOXJ1Q92949 421 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 NTAN1Q96AB6 310 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 TRIM11Q96F44 468 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 TOE1Q96GM8 510 aaKnown RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 RPL10LQ96L21 214 aaKnown RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 OSBPL2Q9H1P3 480 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 MPP6Q9NZW5 540 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 PPARGC1AQ9UBK2 798 aaKnown RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 SLCO3A1Q9UIG8 710 aa16.16■□□□□ 0.18
CCDC78-216ENST00000544996 CDV3Q9UKY7 258 aaKnown RBP16.16■□□□□ 0.18
CCDC78-216ENST00000544996 TTC34A8MYJ7 566 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 DDX3XO00571 662 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 SIN3BO75182 1162 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 IGLV3-19P01714 112 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 MYBL1P10243 752 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 NUMBP49757 651 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 STK19P49842 368 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 VASPP50552 380 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 RPS14P62263 151 aaKnown RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 NRG1Q02297 640 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF33AQ06730 810 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 RSPO4Q2I0M5 234 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 ACCSLQ4AC99 568 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 RAB6CQ53S08 254 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 SYCP2LQ5T4T6 812 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 PLEKHA7Q6IQ23 1121 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 SCYL2Q6P3W7 929 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF783Q6ZMS7 281 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 SLFN11Q7Z7L1 901 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 RNF214Q8ND24 703 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 NETO1Q8TDF5 533 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 ALG14Q96F25 216 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 RAB6CQ9H0N0 254 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 RSPH9Q9H1X1 276 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 MTG2Q9H4K7 406 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 RETREG1Q9H6L5 497 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 CD93Q9NPY3 652 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 WSB2Q9NYS7 404 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 CNOT8Q9UFF9 292 aaKnown RBP16.15■□□□□ 0.18
CCDC78-216ENST00000544996 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 OR51B4Q9Y5P0 310 aa16.15■□□□□ 0.18
CCDC78-216ENST00000544996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.14■□□□□ 0.17
CCDC78-216ENST00000544996 ILVBLA1L0T0 632 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms