RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 RSPH3Q86UC2 560 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 RBM15BQ8NDT2 890 aaKnown RBP12.74□□□□□ -0.37
PAAF1-215ENST00000544909 ZNF333Q96JL9 665 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 TEKT5Q96M29 485 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 RILPQ96NA2 401 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 CCDC28BQ9BUN5 200 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 APOL6Q9BWW8 343 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 ULBP1Q9BZM6 244 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 RNF39Q9H2S5 420 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 SNX15Q9NRS6 342 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 DDX43Q9NXZ2 648 aaKnown RBP12.74□□□□□ -0.37
PAAF1-215ENST00000544909 DONSONQ9NYP3 566 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 AAR2Q9Y312 384 aaKnown RBP12.74□□□□□ -0.37
PAAF1-215ENST00000544909 SLCO1B7G3V0H7 640 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 TREHO43280 583 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 HCRTO43612 131 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 CYP11A1P05108 521 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 THP07101 528 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 RALBP11234 206 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 CPA3P15088 417 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 HOXC13P31276 330 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 NUMBP49757 651 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 AP2B1P63010 937 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 BTKQ06187 659 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 KPNB1Q14974 876 aaKnown RBP12.74□□□□□ -0.37
PAAF1-215ENST00000544909 MUM1Q2TAK8 710 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 MDH1BQ5I0G3 518 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 BRMS1LQ5PSV4 323 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 TMCO4Q5TGY1 634 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 SNX30Q5VWJ9 437 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 SYPL2Q5VXT5 272 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 CES4AQ5XG92 561 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 TREML1Q86YW5 311 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 CNTN4Q8IWV2 1026 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 GPATCH11Q8N954 259 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 SOCS4Q8WXH5 440 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 KIFC1Q9BW19 673 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 DNAJC16Q9Y2G8 782 aa12.74□□□□□ -0.37
PAAF1-215ENST00000544909 FNDC1Q4ZHG4 1894 aaPredicted RBP12.73□□□□□ -0.37
PAAF1-215ENST00000544909 FGF10O15520 208 aaPredicted RBP12.73□□□□□ -0.37
PAAF1-215ENST00000544909 CCNT2O60583 730 aaKnown RBP12.73□□□□□ -0.37
PAAF1-215ENST00000544909 AP1G2O75843 785 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 SMNDC1O75940 238 aaKnown RBP eCLIP12.73□□□□□ -0.37
PAAF1-215ENST00000544909 COPAP53621 1224 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 KLC1Q07866 573 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 ASPHQ12797 758 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 MPP3Q13368 585 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 LRRC74BQ6ZQY2 392 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 ULK2Q8IYT8 1036 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 KIRREL3Q8IZU9 778 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 CCDC33Q8N5R6 958 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 ARRDC4Q8NCT1 418 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 TTC8Q8TAM2 541 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 FATE1Q969F0 183 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 LPIN3Q9BQK8 851 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 ACBD6Q9BR61 282 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 C20orf27Q9GZN8 174 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 DDIT4Q9NX09 232 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 KLK14Q9P0G3 267 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.73□□□□□ -0.37
PAAF1-215ENST00000544909 ARMCX1Q9P291 453 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 MFHAS1Q9Y4C4 1052 aa12.73□□□□□ -0.37
PAAF1-215ENST00000544909 YJEFN3A6XGL0 299 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 HHLA1C9JL84 531 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 ZNF623O75123 536 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 SIN3BO75182 1162 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 BEST1O76090 585 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 IGLV3-25P01717 112 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 PRKCGP05129 697 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 ENO1P06733 434 aaKnown RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 ODC1P11926 461 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 CCNCP24863 283 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 CPOXP36551 454 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 SERPINB5P36952 375 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 MAP3K7CLP57077 242 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 MRPS6P82932 125 aaKnown RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 XIAPP98170 497 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 PURAQ00577 322 aaKnown RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 NRG1Q02297 640 aaPredicted RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 NME3Q13232 169 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 RFWD3Q6PCD5 774 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 MRPL10Q7Z7H8 261 aaKnown RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 MYLK4Q86YV6 388 aaPredicted RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
PAAF1-215ENST00000544909 PCED1BQ96HM7 432 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 CNDP1Q96KN2 507 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 HAPLN3Q96S86 360 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 SORT1Q99523 831 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 GPR22Q99680 433 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 SMOQ99835 787 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 GORASP1Q9BQQ3 440 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 VCX3BQ9H321 246 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 RHOJQ9H4E5 214 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
PAAF1-215ENST00000544909 GOLGA2P5Q9HBQ8 144 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms