RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SLC2A3P11169 496 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 CD70P32970 193 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 KRT9P35527 623 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 CCT8P50990 548 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 BPIFB4P59827 614 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 ZBTB16Q05516 673 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 MS4A13Q5J8X5 152 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
DDX55-212ENST00000544738 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 LAYNQ6UX15 382 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 TAC4Q86UU9 113 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 CYB5D2Q8WUJ1 264 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 TTC17Q96AE7 1141 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 PPP1R13BQ96KQ4 1090 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 PCED1AQ9H1Q7 454 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDX55-212ENST00000544738 ASNSD1Q9NWL6 643 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 TJP2Q9UDY2 1190 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 DNAJC12Q9UKB3 198 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 PIEZO2Q9H5I5 2752 aa16.76■□□□□ 0.27
DDX55-212ENST00000544738 CKAP5Q14008 2032 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 PCDHGA12O60330 932 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 MOCS3O95396 460 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 MOCS2O96007 188 aaPredicted RBP16.75■□□□□ 0.27
DDX55-212ENST00000544738 C7P10643 843 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 ST8SIA6P61647 398 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 RPS24P62847 133 aaKnown RBP16.75■□□□□ 0.27
DDX55-212ENST00000544738 CDK17Q00537 523 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 APBA1Q02410 837 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 MTA1Q13330 715 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 CDH18Q13634 790 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 INAVAQ3KP66 663 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 DCAF6Q58WW2 860 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 CARNMT1Q8N4J0 409 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 ATP6V0D2Q8N8Y2 350 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 WFDC5Q8TCV5 224 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 FGF11Q92914 225 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 PRICKLE1Q96MT3 831 aaPredicted RBP16.75■□□□□ 0.27
DDX55-212ENST00000544738 TUBGCP2Q9BSJ2 902 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 C6orf106Q9H6K1 298 aaPredicted RBP16.75■□□□□ 0.27
DDX55-212ENST00000544738 TM9SF3Q9HD45 589 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 SIX2Q9NPC8 291 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 CEP83Q9Y592 693 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 COL6A6A6NMZ7 2263 aa16.75■□□□□ 0.27
DDX55-212ENST00000544738 COL12A1Q99715 3063 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 CBX4O00257 560 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 ENC1O14682 589 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 HSF2BPO75031 334 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 IGLV3-25P01717 112 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 ABCB4P21439 1286 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
DDX55-212ENST00000544738 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 DPCR1Q3MIW9 517 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 VWA3BQ502W6 1294 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 ZC3H12AQ5D1E8 599 aaKnown RBP16.74■□□□□ 0.27
DDX55-212ENST00000544738 KCNT1Q5JUK3 1230 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 PRAMEF14Q5SWL7 426 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 CLEC17AQ6ZS10 378 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 ADAT2Q7Z6V5 191 aaKnown RBP16.74■□□□□ 0.27
DDX55-212ENST00000544738 LGI2Q8N0V4 545 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 WDTC1Q8N5D0 677 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 FAM181AQ8N9Y4 354 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 KDM1BQ8NB78 822 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 LMLNQ96KR4 655 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 CPXM1Q96SM3 734 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
DDX55-212ENST00000544738 PRSS16Q9NQE7 514 aa16.74■□□□□ 0.27
DDX55-212ENST00000544738 KCNU1A8MYU2 1149 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 ERVH48-1M5A8F1 160 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 FOXN3O00409 490 aaPredicted RBP16.73■□□□□ 0.27
DDX55-212ENST00000544738 LUC7L3O95232 432 aaKnown RBP16.73■□□□□ 0.27
DDX55-212ENST00000544738 LDOC1O95751 146 aaPredicted RBP16.73■□□□□ 0.27
DDX55-212ENST00000544738 DNTTP04053 509 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 TACR2P21452 398 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 CCR1P32246 355 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 CLCN1P35523 988 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 TLE3Q04726 772 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 EIF4EBP2Q13542 120 aaPredicted RBP16.73■□□□□ 0.27
DDX55-212ENST00000544738 RTP5Q14D33 572 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 TAF5Q15542 800 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 TTC31Q49AM3 519 aaPredicted RBP16.73■□□□□ 0.27
DDX55-212ENST00000544738 MIIPQ5JXC2 388 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 C11orf57Q6ZUT1 292 aaPredicted RBP16.73■□□□□ 0.27
DDX55-212ENST00000544738 CHSY1Q86X52 802 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 GATAD2AQ86YP4 633 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 LURAP1LQ8IV03 231 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 FAM71AQ8IYT1 594 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 DEFB106AQ8N104 65 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 CFAP52Q8N1V2 620 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 ZNF366Q8N895 744 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 SNIP1Q8TAD8 396 aaKnown RBP16.73■□□□□ 0.27
DDX55-212ENST00000544738 RNF34Q969K3 372 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 SLC2A13Q96QE2 648 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 NRSN2Q9GZP1 204 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 FAM204AQ9H8W3 233 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 SCML1Q9UN30 329 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 PCDHGA1Q9Y5H4 931 aa16.73■□□□□ 0.27
DDX55-212ENST00000544738 F5H5T6 163 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms