RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 C16orf96A6NNT2 1141 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 DDX58O95786 925 aaKnown RBP4.08□□□□□ -1.76
SCFD1-207ENST00000544052 CYP2D6P10635 497 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 ARSAP15289 507 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 IGFBP2P18065 325 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 PRPH2P23942 346 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 NDUFS1P28331 727 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 SLC8A1P32418 973 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 ADRA1BP35368 520 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 CCT8P50990 548 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 B4GALNT1Q00973 533 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 CFHR3Q02985 330 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 TBL3Q12788 808 aaKnown RBP4.08□□□□□ -1.76
SCFD1-207ENST00000544052 ZXDCQ2QGD7 858 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-207ENST00000544052 LSM12Q3MHD2 195 aaKnown RBP4.08□□□□□ -1.76
SCFD1-207ENST00000544052 MTFR2Q6P444 385 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 SLC22A25Q6T423 547 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 Q6YL49 198 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 SLC39A5Q6ZMH5 540 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 ARMC8Q8IUR7 673 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 LINC01465Q8N7H1 131 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 CAVIN3Q969G5 261 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 C7orf26Q96N11 449 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 MPHOSPH8Q99549 860 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 ADGRE3Q9BY15 652 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 CIPCQ9C0C6 399 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 SLC25A18Q9H1K4 315 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 ASIC5Q9NY37 505 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 KLQ9UEF7 1012 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 CASKIN1Q8WXD9 1431 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 INO80Q9ULG1 1556 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-207ENST00000544052 ADGBQ8N7X0 1667 aa4.08□□□□□ -1.76
SCFD1-207ENST00000544052 SUPT6HQ7KZ85 1726 aaKnown RBP4.08□□□□□ -1.76
SCFD1-207ENST00000544052 H3BNC9 293 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 TNPO2O14787 897 aaKnown RBP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 F9P00740 461 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 ALDOCP09972 364 aaKnown RBP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 HKR1P10072 659 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 ATF7P17544 494 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 PAFAH1B1P43034 410 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 POLD2P49005 469 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 MVDP53602 400 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 MRPS35P82673 323 aaKnown RBP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 COL4A3Q01955 1670 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 TIAM1Q13009 1591 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 AWAT1Q58HT5 328 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 DENND2CQ68D51 928 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 RNF144BQ7Z419 303 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 HS6ST2Q96MM7 605 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 LBHD1Q9BQE6 289 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 CLSTN3Q9BQT9 956 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 HTATIP2Q9BUP3 242 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 TRIM31Q9BZY9 425 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 TMPRSS5Q9H3S3 457 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 LRIT1Q9P2V4 623 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 HDAC6Q9UBN7 1215 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 CD207Q9UJ71 328 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 PLXNC1O60486 1568 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 SYCP2Q9BX26 1530 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 ATP10AO60312 1499 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 FYCO1Q9BQS8 1478 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 C9orf84Q5VXU9 1444 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 FSD2A1L4K1 749 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 CD72P21854 359 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 TGM1P22735 817 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 SFPQP23246 707 aaKnown RBP eCLIP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 MPP3Q13368 585 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 PRICKLE4Q2TBC4 344 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 MIIPQ5JXC2 388 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 NAPEPLDQ6IQ20 393 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 MTHFD1LQ6UB35 978 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 ADGRG6Q86SQ4 1221 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 RASAL3Q86YV0 1011 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 LAS2Q8IYD9 372 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 TERB1Q8NA31 727 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 SRFBP1Q8NEF9 429 aaKnown RBP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 LINC00476Q8WZB0 136 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 NPAS1Q99742 590 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 CYP4F11Q9HBI6 524 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 ASNSD1Q9NWL6 643 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 SEMA5BQ9P283 1151 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 NRBP1Q9UHY1 535 aa4.07□□□□□ -1.76
SCFD1-207ENST00000544052 HEMK1Q9Y5R4 338 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-207ENST00000544052 MROH2AA6NES4 1674 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 CLTCQ00610 1675 aaKnown RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 CCDC18Q5T9S5 1454 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ZNF518AQ6AHZ1 1483 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 MLH3Q9UHC1 1453 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 MGST3O14880 152 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 TULP3O75386 442 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ESRRBO95718 433 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 MT-CO3P00414 261 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 DRD4P21917 467 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 MAPK4P31152 587 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 RGS2P41220 211 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 VPS41P49754 854 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 HSPA2P54652 639 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ARHGAP8P85298 464 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ALKBH1Q13686 389 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms