RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	MRPS17	Q9Y2R5	130 aa	Known RBP	10.43	□□□□□ -0.74
CPSF7-221	ENST00000543545	ILVBL	A1L0T0	632 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ARHGAP42	A6NI28	874 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	C3orf70	A6NLC5	250 aa	Predicted RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	WASH4P	A8MWX3	477 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	DFFA	O00273	331 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	DCLK1	O15075	740 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	CEP104	O60308	925 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	CST8	O60676	142 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	TJP3	O95049	919 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	KAT7	O95251	611 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	CISD3	P0C7P0	127 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	POLR2E	P19388	210 aa	Known RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	MZF1	P28698	734 aa	Predicted RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	HLA-F	P30511	346 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	CXCR5	P32302	372 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	SERPINB6	P35237	376 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ETFB	P38117	255 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	EIF2D	P41214	584 aa	Known RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ETF1	P62495	437 aa	Known RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	GNA12	Q03113	381 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	UBXN2B	Q14CS0	331 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	PPP2R5E	Q16537	467 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ASTL	Q6HA08	431 aa	Predicted RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	CXorf57	Q6NSI4	855 aa	Known RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	SYT10	Q6XYQ8	523 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ANKS1B	Q7Z6G8	1248 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	VSIG1	Q86XK7	387 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	SUGP1	Q8IWZ8	645 aa	Known RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	AHI1	Q8N157	1196 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	LZTR1	Q8N653	840 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	PQLC3	Q8N755	202 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	NETO2	Q8NC67	525 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	OR7D4	Q8NG98	312 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	WFIKKN2	Q8TEU8	576 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ZNF592	Q92610	1267 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	FAF2	Q96CS3	445 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	PBK	Q96KB5	322 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	FEM1A	Q9BSK4	669 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	MFSD1	Q9H3U5	465 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	PRDM16	Q9HAZ2	1276 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ATP13A1	Q9HD20	1204 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	NDFIP2	Q9NV92	336 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	ETNK2	Q9NVF9	386 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	FBXO10	Q9UK96	956 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	HPCAL4	Q9UM19	191 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	NEU3	Q9UQ49	428 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	TBC1D30	Q9Y2I9	924 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	MFHAS1	Q9Y4C4	1052 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	HEY1	Q9Y5J3	304 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	DOCK8	Q8NF50	2099 aa		10.42	□□□□□ -0.74
CPSF7-221	ENST00000543545	COL6A3	P12111	3177 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	hCG_1818297	A0A087WSY0	165 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545		A0A0D9SEW6	157 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ZNF487	B1APH4	448 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	RASA4B	C9J798	803 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	CBX4	O00257	560 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	RASA4	O43374	803 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	TIMM44	O43615	452 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ATP5B	P06576	529 aa	Known RBP	10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ALAD	P13716	330 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	DRD1	P21728	446 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ACVRL1	P37023	503 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	PAPOLA	P51003	745 aa	Known RBP	10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	NDST2	P52849	883 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	SEC13	P55735	322 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	YBEY	P58557	167 aa	Predicted RBP	10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	SLC12A1	Q13621	1099 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	DMC1	Q14565	340 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	GEN1	Q17RS7	908 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	PLEKHG6	Q3KR16	790 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	PARP15	Q460N3	678 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	PITRM1	Q5JRX3	1037 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ARTN	Q5T4W7	220 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	DCAF12L1	Q5VU92	463 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	MBLAC2	Q68D91	279 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	RNF43	Q68DV7	783 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	NCBP2-AS2	Q69YL0	99 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ZNF783	Q6ZMS7	281 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	BZW1	Q7L1Q6	419 aa	Known RBP	10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	APCDD1	Q8J025	514 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	UMODL1-AS1	Q8N2C9	162 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	CCDC33	Q8N5R6	958 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	OR52K2	Q8NGK3	314 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	UCMA	Q8WVF2	138 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	EDA	Q92838	391 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	HAUS1	Q96CS2	278 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	HMCES	Q96FZ2	354 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	SLC39A8	Q9C0K1	460 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	MAGEH1	Q9H213	219 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	CARD9	Q9H257	536 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ZNF212	Q9UDV6	495 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	PLA2G4C	Q9UP65	541 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	SLC27A6	Q9Y2P4	619 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	ANAPC1	Q9H1A4	1944 aa		10.41	□□□□□ -0.74
CPSF7-221	ENST00000543545	KRBA1	A5PL33	1030 aa		10.4	□□□□□ -0.74
CPSF7-221	ENST00000543545	FAM170B	A6NMN3	283 aa		10.4	□□□□□ -0.74
CPSF7-221	ENST00000543545	PRRT4	C9JH25	899 aa		10.4	□□□□□ -0.74
CPSF7-221	ENST00000543545	MAP3K6	O95382	1288 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms