RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZPBP2Q6X784 338 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 ZDHHC13Q8IUH4 622 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 FIG4Q92562 907 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 OTUB1Q96FW1 271 aaPredicted RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 ROGDIQ9GZN7 287 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 ZMYND8Q9ULU4 1186 aaPredicted RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 PCDHA11Q9Y5I1 949 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 FASTKD3Q14CZ7 662 aaKnown RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 ZNF554Q86TJ5 538 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 TMEM161BQ8NDZ6 487 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 DNERQ8NFT8 737 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 C6orf62Q9GZU0 229 aaPredicted RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 VPS26AO75436 327 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 MED26O95402 600 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 EPHA3P29320 983 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 CPT1AP50416 773 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 NPY5RQ15761 445 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 CCDC142Q17RM4 750 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 HPS6Q86YV9 775 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 BBS7Q8IWZ6 715 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 SNX31Q8N9S9 440 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 POMKQ9H5K3 350 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 PNPOQ9NVS9 261 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 WWOXQ9NZC7 414 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 PLLPQ9Y342 182 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 STX7O15400 261 aaKnown RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 HSMCR30P0CW71 290 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 NELFEP18615 380 aaKnown RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 FOXN2P32314 431 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 TWF1Q12792 350 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 SLC44A1Q8WWI5 657 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 DCUN1D1Q96GG9 259 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 RNF157Q96PX1 679 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 WDR18Q9BV38 432 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 MID1IP1Q9NPA3 183 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 TUBGCP4Q9UGJ1 667 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 ASMTLO95671 621 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 ARMC4Q5T2S8 1044 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 VSTM1Q6UX27 236 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 ZBTB46Q86UZ6 589 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 STX19Q8N4C7 294 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 ZNF513Q8N8E2 541 aaPredicted RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 C12orf50Q8NA57 414 aaPredicted RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 UCMAQ8WVF2 138 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 CERS2Q96G23 380 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 CLK4Q9HAZ1 481 aaKnown RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 PTPRHQ9HD43 1115 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 KLK14Q9P0G3 267 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 STK39Q9UEW8 545 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 WASF2Q9Y6W5 498 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 CNOT3O75175 753 aaKnown RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 LAMTOR4Q0VGL1 99 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 NR6A1Q15406 480 aa19.71■□□□□ 0.75
SUDS3-204ENST00000543473 TIGD7Q6NT04 549 aaPredicted RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 FAM120BQ96EK7 910 aaKnown RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 HBS1LQ9Y450 684 aaKnown RBP19.71■□□□□ 0.75
SUDS3-204ENST00000543473 ACAT1P24752 427 aaKnown RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 GPR107Q5VW38 600 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 UNC5AQ6ZN44 842 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 SPATA17Q96L03 361 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 TAS2R1Q9NYW7 299 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 A0A0A0MRY4 1105 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 MSX2P35548 267 aaPredicted RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 CNTN2Q02246 1040 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 MSLNQ13421 630 aaPredicted RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 SNX17Q15036 470 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 RFWD3Q6PCD5 774 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 METTL7BQ6UX53 244 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 TNS4Q8IZW8 715 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 EID3Q8N140 333 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ADCY4Q8NFM4 1077 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 SPATA13Q96N96 652 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 TIMMDC1Q9NPL8 285 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ANAPC2Q9UJX6 822 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 PDHXO00330 501 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ZBTB24O43167 697 aaPredicted RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 HS6ST1O60243 411 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ITGA2BP08514 1039 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 SLC6A3Q01959 620 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 USP4Q13107 963 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ZACNQ401N2 412 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ACSBG2Q5FVE4 666 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 PERM1Q5SV97 790 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 RNF219Q5W0B1 726 aaPredicted RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ABRAXAS1Q6UWZ7 409 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 C10orf107Q8IVU9 208 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 SVOPQ8N4V2 548 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 TRIM45Q9H8W5 580 aaPredicted RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 SPAG4Q9NPE6 437 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 SLC38A7Q9NVC3 462 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 POLG2Q9UHN1 485 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ITGA11Q9UKX5 1188 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 RTN3O95197 1032 aaPredicted RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 PIK3R1P27986 724 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 TDRD10Q5VZ19 366 aaKnown RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 ZDHHC17Q8IUH5 632 aa19.7■□□□□ 0.74
SUDS3-204ENST00000543473 CELF6Q96J87 481 aaKnown RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 MTG1Q9BT17 334 aaPredicted RBP19.7■□□□□ 0.74
SUDS3-204ENST00000543473 RBM22Q9NW64 420 aaKnown RBP eCLIP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms