RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 SIK2Q9H0K1 926 aa17.98■□□□□ 0.47
LTBR-210ENST00000542830 SGK2Q9HBY8 427 aa17.98■□□□□ 0.47
LTBR-210ENST00000542830 NCKAP1Q9Y2A7 1128 aa17.98■□□□□ 0.47
LTBR-210ENST00000542830 LAMA1P25391 3075 aa17.98■□□□□ 0.47
LTBR-210ENST00000542830 CACNA1EQ15878 2313 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 CHRNB2P17787 502 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 TFE3P19532 575 aaPredicted RBP17.97■□□□□ 0.47
LTBR-210ENST00000542830 MAOBP27338 520 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 MZF1P28698 734 aaPredicted RBP17.97■□□□□ 0.47
LTBR-210ENST00000542830 RDXP35241 583 aaKnown RBP17.97■□□□□ 0.47
LTBR-210ENST00000542830 ANO6Q4KMQ2 910 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 C2CD6Q53TS8 623 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 C9orf64Q5T6V5 341 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 LRSAM1Q6UWE0 723 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 LRRC31Q6UY01 552 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 APTXQ7Z2E3 356 aaKnown RBP17.97■□□□□ 0.47
LTBR-210ENST00000542830 HDDC3Q8N4P3 179 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 C1orf74Q96LT6 269 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 GTPBP2Q9BX10 602 aaKnown RBP17.97■□□□□ 0.47
LTBR-210ENST00000542830 ZDHHC5Q9C0B5 715 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 HSD3B7Q9H2F3 369 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 PABPC3Q9H361 631 aaKnown RBP17.97■□□□□ 0.47
LTBR-210ENST00000542830 MTG2Q9H4K7 406 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 SLCO3A1Q9UIG8 710 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 TBC1D30Q9Y2I9 924 aa17.97■□□□□ 0.47
LTBR-210ENST00000542830 SMTNL1A8MU46 457 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 TTC34A8MYJ7 566 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 OPHN1O60890 802 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 SEMA4FO95754 770 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 CCDC172P0C7W6 258 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 ACSL1P33121 698 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 GGCXP38435 758 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 NOVA1P51513 510 aaKnown RBP17.96■□□□□ 0.47
LTBR-210ENST00000542830 CST6Q15828 149 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 PSAPL1Q6NUJ1 521 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 BNIPLQ7Z465 357 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 C14orf80Q86SX3 495 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 RPL10LQ96L21 214 aaKnown RBP17.96■□□□□ 0.47
LTBR-210ENST00000542830 HAPLN3Q96S86 360 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 FEM1AQ9BSK4 669 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 MIR1-1HGQ9H1L0 117 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 METTL5Q9NRN9 209 aaKnown RBP17.96■□□□□ 0.47
LTBR-210ENST00000542830 SLC25A13Q9UJS0 675 aa17.96■□□□□ 0.47
LTBR-210ENST00000542830 ASCC3Q8N3C0 2202 aaKnown RBP17.96■□□□□ 0.47
LTBR-210ENST00000542830 FAM170AA1A519 330 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 UPK3BL1B0FP48 263 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 UPK3BL2E5RIL1 263 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 BCAT2O15382 392 aaPredicted RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 UNGP13051 313 aaPredicted RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 ATP1A3P13637 1013 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 CEACAM1P13688 526 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 NSFP46459 744 aaKnown RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 STK19P49842 368 aaPredicted RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 GSCP56915 257 aaPredicted RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 ELAVL3Q14576 367 aaKnown RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 N4BP2L1Q5TBK1 243 aaPredicted RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 SH3PXD2AQ5TCZ1 1133 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 CAVIN1Q6NZI2 390 aaKnown RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 SETD3Q86TU7 594 aaPredicted RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 MMAAQ8IVH4 418 aaKnown RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 ZCCHC9Q8N567 271 aaKnown RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 MINDY1Q8N5J2 469 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 GANCQ8TET4 914 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 ALG14Q96F25 216 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 CFAP57Q96MR6 1250 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 C11orf70Q9BRQ4 267 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 MUC3BQ9H195 1237 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 SLC32A1Q9H598 525 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 C6orf106Q9H6K1 298 aaPredicted RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 FSCN3Q9NQT6 498 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 ANLNQ9NQW6 1124 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 FBXL12Q9NXK8 326 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 EIF2B4Q9UI10 523 aaKnown RBP17.95■□□□□ 0.46
LTBR-210ENST00000542830 VPS28Q9UK41 221 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 PCDH15Q96QU1 1955 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 NUMA1Q14980 2115 aa17.95■□□□□ 0.46
LTBR-210ENST00000542830 IGLV3-10A0A075B6K4 115 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 DRGXA6NNA5 263 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 ENDOD1O94919 500 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 ADH1BP00325 375 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 CALB1P05937 261 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 RHOCP08134 193 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 SDC4P31431 198 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 IRAK1P51617 712 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 KRT83P78385 493 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 CLEC16AQ2KHT3 1053 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 FILIP1LQ4L180 1135 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 TRNP1Q6NT89 227 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 ZNF683Q8IZ20 524 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 SLC30A5Q8TAD4 765 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 SNX19Q92543 992 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 PTPRN2Q92932 1015 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 DNAAF2Q9NVR5 837 aaKnown RBP17.94■□□□□ 0.46
LTBR-210ENST00000542830 ADAM22Q9P0K1 906 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 FZD4Q9ULV1 537 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.94■□□□□ 0.46
LTBR-210ENST00000542830 OR51B4Q9Y5P0 310 aa17.94■□□□□ 0.46
LTBR-210ENST00000542830 E9PAM4 449 aa17.93■□□□□ 0.46
LTBR-210ENST00000542830 I6L893 689 aaPredicted RBP17.93■□□□□ 0.46
LTBR-210ENST00000542830 MID1O15344 667 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms