RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MTTPP55157 894 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 PDCLQ13371 301 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 KPNB1Q14974 876 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 ODF1Q14990 250 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 SPCS2Q15005 226 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 KHDC1Q4VXA5 237 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 DAB2IPQ5VWQ8 1189 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 GALNT17Q6IS24 598 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 NEPROQ6NW34 567 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 TAPT1Q6NXT6 567 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 G2E3Q7L622 706 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 RASGRP2Q7LDG7 609 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 NANOGNBQ7Z5D8 188 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 PHLDB2Q86SQ0 1253 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 MMGT1Q8N4V1 131 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 GDAP1Q8TB36 358 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 DEPTORQ8TB45 409 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 ACMSDQ8TDX5 336 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 DQX1Q8TE96 717 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 WDR60Q8WVS4 1066 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 RAB3IPQ96QF0 476 aaPredicted RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 NR1H4Q96RI1 486 aaPredicted RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 TRIB1Q96RU8 372 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 RHOXF2Q9BQY4 288 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 CENPKQ9BS16 269 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 OSBPL10Q9BXB5 764 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 AGXT2Q9BYV1 514 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 CARD9Q9H257 536 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 CNOT10Q9H9A5 744 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 CPNE5Q9HCH3 593 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 KCNMB3Q9NPA1 279 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 MAN1C1Q9NR34 630 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 ECHDC1Q9NTX5 307 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 HERC5Q9UII4 1024 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 RCOR1Q9UKL0 485 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 TTC7AQ9ULT0 858 aaPredicted RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 SATB2Q9UPW6 733 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 R3HDM2Q9Y2K5 976 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 LRCH1Q9Y2L9 728 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 LUC7L2Q9Y383 392 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 N6AMT1Q9Y5N5 214 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 FADS3Q9Y5Q0 445 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 MAP3K19Q56UN5 1328 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 WDR17Q8IZU2 1322 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 LAMB4A4D0S4 1761 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 ADAMTS13Q76LX8 1427 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 VPS37CA5D8V6 355 aaPredicted RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 MAGEA13PA6NCF6 341 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 CCT8L1PA6NM43 557 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 E7EVH7 732 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 EIF3FO00303 357 aaPredicted RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 DNM1LO00429 736 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 PSMD14O00487 310 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 ASAP2O43150 1006 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 PROM1O43490 865 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 NQO1P15559 274 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 PPP3CBP16298 524 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 MALP21145 153 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 IBSPP21815 317 aaPredicted RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 GRIA3P42263 894 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 LIFRP42702 1097 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 UBASH3AP57075 661 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 GEMIN4P57678 1058 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 AMPD3Q01432 767 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 MYL5Q02045 173 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 PPIDQ08752 370 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 ITGA9Q13797 1035 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 PPP1R7Q15435 360 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 BOLA3Q53S33 107 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 SPDYCQ5MJ68 293 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 SPECC1LQ69YQ0 1117 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 OR52E8Q6IFG1 317 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 ANO7Q6IWH7 933 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 TMEM53Q6P2H8 277 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 BLOC1S2Q6QNY1 142 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 UNC13DQ70J99 1090 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 MCM10Q7L590 875 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 NLRP9Q7RTR0 991 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 TRAPPC11Q7Z392 1133 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 GRASPQ7Z6J2 395 aaPredicted RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 TTC7BQ86TV6 843 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 EXOC3L1Q86VI1 746 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 CROCCP3Q8IVE0 287 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 KIRREL3Q8IZU9 778 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 CLASRPQ8N2M8 674 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 RNF10Q8N5U6 811 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 ARL10Q8N8L6 244 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 MLKLQ8NB16 471 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 CCDC197Q8NCU1 140 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 ENGASEQ8NFI3 743 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 CCDC110Q8TBZ0 833 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 NSUN6Q8TEA1 469 aaKnown RBP6.15□□□□□ -1.42
XRCC4-206ENST00000542685 AGAP11Q8TF27 550 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 HIC2Q96JB3 615 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 PGBD1Q96JS3 809 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 ATP6V1G3Q96LB4 118 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 UROC1Q96N76 676 aa6.15□□□□□ -1.42
XRCC4-206ENST00000542685 GBP5Q96PP8 586 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms