RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SKILP12757 684 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 GPD1P21695 349 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 MPLP40238 635 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 ZNF143P52747 638 aaPredicted RBP15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 RPL7AP62424 266 aaKnown RBP15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 ZBED6P86452 979 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 LMNB2Q03252 620 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 CDO1Q16878 200 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 HNRNPA1L2Q32P51 320 aaKnown RBP15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 PLEKHA7Q6IQ23 1121 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 KIAA1324Q6UXG2 1013 aaKnown RBP15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 LRRC31Q6UY01 552 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 PRR23CQ6ZRP0 262 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 TMEFF1Q8IYR6 380 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 FAM172AQ8WUF8 416 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 SIPA1Q96FS4 1042 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 XPO4Q9C0E2 1151 aaKnown RBP15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 OSBPL2Q9H1P3 480 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 VPS45Q9NRW7 570 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 SLCO3A1Q9UIG8 710 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 USP18Q9UMW8 372 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 CYP8B1Q9UNU6 501 aa15.9■□□□□ 0.14
ECHDC2-223ENST00000542552 CACNA1AO00555 2505 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 FTLP02792 175 aaPredicted RBP15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 GYPCP04921 128 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 PTGER3P43115 390 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 TPMTP51580 245 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 ST8SIA6P61647 398 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 CREB5Q02930 508 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 SULT2A1Q06520 285 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 MAMLD1Q13495 774 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 C9orf64Q5T6V5 341 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 MANEALQ5VSG8 457 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 SETD3Q86TU7 594 aaPredicted RBP15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 PRCCQ92733 491 aaPredicted RBP15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 NTAN1Q96AB6 310 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 MCEEQ96PE7 176 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 CNPY3Q9BT09 278 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 ISCUQ9H1K1 167 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 RSPH9Q9H1X1 276 aaPredicted RBP15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 MTG2Q9H4K7 406 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 PARVAQ9NVD7 372 aa15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 BZW2Q9Y6E2 419 aaKnown RBP15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.89■□□□□ 0.13
ECHDC2-223ENST00000542552 NYNRINQ9P2P1 1898 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 GON4LQ3T8J9 2241 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 TARSL2A2RTX5 802 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 TMCO5BA8MYB1 307 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 TTC34A8MYJ7 566 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 PRR5-ARHGAP8B1AHC4 643 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 AP5Z1O43299 807 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 CCP110O43303 1012 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 SIN3BO75182 1162 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 RTN2O75298 545 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 DHPSP49366 369 aaPredicted RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 STK19P49842 368 aaPredicted RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 RPS14P62263 151 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 ARHGAP8P85298 464 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 OGDHQ02218 1023 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 RPL6Q02878 288 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 ZBTB16Q05516 673 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 SCAPQ12770 1279 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 SF3A2Q15428 464 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 CCDC6Q16204 474 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 ARL13BQ3SXY8 428 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 PEAR1Q5VY43 1037 aaPredicted RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 RNF219Q5W0B1 726 aaPredicted RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 DNAAF5Q86Y56 855 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 CCDC185Q8N715 623 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 FRS2Q8WU20 508 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 CPLX3Q8WVH0 158 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 ZNF419Q96HQ0 510 aaPredicted RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 RPL10LQ96L21 214 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 ZYG11BQ9C0D3 744 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 WSB2Q9NYS7 404 aaPredicted RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 MPP6Q9NZW5 540 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 OR12D3Q9UGF7 316 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 NEU3Q9UQ49 428 aa15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 LUC7L2Q9Y383 392 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-223ENST00000542552 CHD5Q8TDI0 1954 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 EDDM13A0A1B0GTR0 161 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 ANKRD62A6NC57 917 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 TMEM191CA6NGB0 347 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 SRGAP2O75044 1071 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 SERPING1P05155 500 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 TPM3P06753 285 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 CD6P30203 668 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 OXTRP30559 389 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 DCUN1D2Q6PH85 259 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 CYP2U1Q7Z449 544 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 SLC41A1Q8IVJ1 513 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 RMDN1Q96DB5 314 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 TOE1Q96GM8 510 aaKnown RBP15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 FAM129BQ96TA1 746 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 PSMB7Q99436 277 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 MAGEB5Q9BZ81 275 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 SMOC1Q9H4F8 434 aa15.87■□□□□ 0.13
ECHDC2-223ENST00000542552 RETREG1Q9H6L5 497 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms