RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 FHOD1Q9Y613 1164 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 CABIN1Q9Y6J0 2220 aa16.11■□□□□ 0.17
VPS33A-206ENST00000542310 SYNJ2BP-COX16A0A087WUM0 186 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 A0A1B0GVT2 93 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 A0A1W2PP55 124 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 FAM221BA6H8Z2 402 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 LRRC72A6NJI9 287 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 M0QYT0 321 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 FLRT2O43155 660 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 CBFA2T3O75081 653 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 CLDN11O75508 207 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 FSBPO95073 299 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 IGHV4-34P06331 123 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 UCHL3P15374 230 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 C5AR1P21730 350 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 MZF1P28698 734 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 FAM193AP78312 1265 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 KCNMA1Q12791 1236 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 NME3Q13232 169 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 AUHQ13825 339 aaKnown RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 TRIP6Q15654 476 aaKnown RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 HLA-BQ31612 363 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 TCP11X2Q5H9J9 407 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 DBX2Q6ZNG2 339 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 RAB44Q7Z6P3 723 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 CIR1Q86X95 450 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 KDF1Q8NAX2 398 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 OR2T34Q8NGX1 318 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 BAHD1Q8TBE0 780 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 GANCQ8TET4 914 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 PTPRN2Q92932 1015 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 IGSF8Q969P0 613 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 NT5C3BQ969T7 300 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 FAM131CQ96AQ9 280 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 SPAG5Q96R06 1193 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 ORAI3Q9BRQ5 295 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 PLCB1Q9NQ66 1216 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 ARHGEF38Q9NXL2 777 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 COX16Q9P0S2 106 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 SERGEFQ9UGK8 458 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 SLC25A13Q9UJS0 675 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 PCOLCE2Q9UKZ9 415 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 MSRB2Q9Y3D2 182 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 DAAM1Q9Y4D1 1078 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 HS3ST4Q9Y661 456 aa16.1■□□□□ 0.17
VPS33A-206ENST00000542310 COL5A1P20908 1838 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-206ENST00000542310 WDFY3Q8IZQ1 3526 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 A0A1W2PPC4 97 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 C1QTNF9BB2RNN3 333 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 F8VZ95 297 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 ALOX15BO15296 676 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 HYAL3O43820 417 aaPredicted RBP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 PAGE1O75459 146 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 KRT37O76014 449 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 TOP3BO95985 862 aaKnown RBP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 F9P00740 461 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 C1QTNF9P0C862 333 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 GOT1P17174 413 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 SPINK2P20155 84 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 SLC8A1P32418 973 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 PSMD8P48556 350 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 CSNK1EP49674 416 aaKnown RBP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 CXCR3P49682 368 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 STK19P49842 368 aaPredicted RBP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 CCR5P51681 352 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 GALCP54803 685 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 CDH4P55283 916 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 RACK1P63244 317 aaKnown RBP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 CENPCQ03188 943 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 SND1Q7KZF4 910 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 DSG4Q86SJ6 1040 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 MMAAQ8IVH4 418 aaKnown RBP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 FRS2Q8WU20 508 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 C18orf8Q96DM3 657 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 ALG14Q96F25 216 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 RPL10LQ96L21 214 aaKnown RBP16.09■□□□□ 0.17
VPS33A-206ENST00000542310 CAMK1GQ96NX5 476 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 FAM129BQ96TA1 746 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 OMDQ99983 421 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 PDCL3Q9H2J4 239 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 IL21RQ9HBE5 538 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 PIGVQ9NUD9 493 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 SLCO3A1Q9UIG8 710 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 VANGL2Q9ULK5 521 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 ANKRD6Q9Y2G4 727 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 TBC1D30Q9Y2I9 924 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 SLCO1B1Q9Y6L6 691 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 KNL1Q8NG31 2342 aa16.09■□□□□ 0.17
VPS33A-206ENST00000542310 PTPRBP23467 1997 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 PES1O00541 588 aaKnown RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 SLC7A4O43246 635 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ATP9BO43861 1147 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 DFNA5O60443 496 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 RNASEH2AO75792 299 aaKnown RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 FTH1P19P0C7X4 201 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ANP32AP39687 249 aaKnown RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 SULT1E1P49888 294 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 CCT8P50990 548 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms