RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TMEM245Q9H330 911 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CUEDC2Q9H467 287 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 VPS37BQ9H9H4 285 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TRIM39Q9HCM9 518 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 S100A14Q9HCY8 104 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ATP13A1Q9HD20 1204 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 STARD7Q9NQZ5 370 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ZC4H2Q9NQZ6 224 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MAN1C1Q9NR34 630 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SH3GLB2Q9NR46 395 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 DDX18Q9NVP1 670 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 EHD3Q9NZN3 535 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CNOT8Q9UFF9 292 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 GTF2IRD1Q9UHL9 959 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ZMYM5Q9UJ78 669 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 GMEB2Q9UKD1 530 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CNOT11Q9UKZ1 510 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PNMA8BQ9ULN7 279 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 NFU1Q9UMS0 254 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PCDHB10Q9UN67 800 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PCDHA7Q9UN72 937 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 HPSEQ9Y251 543 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 POLHQ9Y253 713 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 DAGLAQ9Y4D2 1042 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 DTNAQ9Y4J8 743 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CEPT1Q9Y6K0 416 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MAST3O60307 1309 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ATP8B3O60423 1300 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 FLT1P17948 1338 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 NEDD4P46934 1319 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MN1Q10571 1320 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PCDH11YQ9BZA8 1340 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PIK3C2AO00443 1686 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 RGPD1P0DJD0 1748 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PEAK1Q9H792 1746 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 TRPM3Q9HCF6 1732 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CRYBG1Q9Y4K1 1723 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CYP3A7-CYP3A51PA0A087WV96 503 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 C15orf38-AP3S2A0A0A6YYH1 394 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 A0A0A6YYJ9 748 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 A0A1B0GWJ7 208 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 A0A1W2PQ67 120 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 A0A1W2PQJ5 194 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 TYW5A2RUC4 315 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 FAM181BA6NEQ2 426 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SLCO1B7G3V0H7 640 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 TRIM77I1YAP6 450 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 E2F3O00716 465 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PJA2O43164 708 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ASNA1O43681 348 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 DYRK3O43781 588 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SNAP91O60641 907 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 EXOC3O60645 756 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RNASEH1O60930 286 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 DNAJC6O75061 913 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CLN5O75503 358 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CDK14O94921 469 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 LYPLA2O95372 231 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 BMP10O95393 424 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ZBTB11O95625 1053 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 APOC1P02654 83 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CYP17A1P05093 508 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 INHBBP09529 407 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SMIM18P0DKX4 95 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 BMP3P12645 472 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ANPEPP15144 967 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 IMPDH1P20839 514 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CYP7A1P22680 504 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CYP3A7P24462 503 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 MAP4P27816 1152 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 HADHAP40939 763 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PHKA1P46020 1223 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CARSP49589 748 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SLC26A2P50443 739 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 NDUFA8P51970 172 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 LIMK1P53667 647 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PSMD4P55036 377 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RAB4BP61018 213 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RPL10AP62906 217 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CDK16Q00536 496 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 IL9RQ01113 521 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 IKZF1Q13422 519 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 NAB1Q13506 487 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 MORC3Q14149 939 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF846Q147U1 533 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 MTF1Q14872 753 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SF3B4Q15427 424 aaKnown RBP eCLIP4.44□□□□□ -1.74e-47■■■■■ 46.5
SNHG1-219ENST00000542112 TMEM95Q3KNT9 176 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SLC10A6Q3KNW5 377 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 NADK2Q4G0N4 442 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 KHDC1Q4VXA5 237 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ESCO2Q56NI9 601 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PLEKHG4Q58EX7 1191 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SLC10A5Q5PT55 438 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CACHD1Q5VU97 1274 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CDKAL1Q5VV42 579 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 HEATR6Q6AI08 1181 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 LETMD1Q6P1Q0 360 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 BLOC1S2Q6QNY1 142 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms