RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 MAPK6Q16659 721 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 PRAMEF14Q5SWL7 426 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 SYCP2LQ5T4T6 812 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 MRPL10Q7Z7H8 261 aaKnown RBP5.84□□□□□ -1.47
CPSF7-220ENST00000541963 THNSL1Q8IYQ7 743 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 SH2D3CQ8N5H7 860 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 RAB24Q969Q5 203 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 ZNF396Q96N95 335 aaPredicted RBP5.84□□□□□ -1.47
CPSF7-220ENST00000541963 ZNF558Q96NG5 402 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 CASD1Q96PB1 797 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 LMF1Q96S06 567 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 VRK1Q99986 396 aaPredicted RBP5.84□□□□□ -1.47
CPSF7-220ENST00000541963 ADPGKQ9BRR6 497 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 NELFAQ9H3P2 528 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 WDCPQ9H6R7 721 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 SEC61A2Q9H9S3 476 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 C17orf75Q9HAS0 396 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 XPNPEP1Q9NQW7 623 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 PNPOQ9NVS9 261 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 KCND2Q9NZV8 630 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 STK39Q9UEW8 545 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 L1RE1Q9UN81 338 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 PCDHB2Q9Y5E7 798 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 COL4A6Q14031 1691 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 SZT2Q5T011 3432 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 MYO9BQ13459 2157 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 A0A1B0GUA9 196 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 CCDC169A6NNP5 214 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 E9PMD0 336 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 H0YCG3 227 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 K7ERI5 159 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 ACKR2O00590 384 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 GRM6O15303 877 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 TSPAN1O60635 241 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 CDC14BO60729 498 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 FGF18O76093 207 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SRGAP2BP0DMP2 458 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 CR2P20023 1033 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 MALP21145 153 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SCP2P22307 547 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 HOXA11P31270 313 aaPredicted RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 ABCD1P33897 745 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 GATMP50440 423 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 AGFG1P52594 562 aaKnown RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 CTXN1P60606 82 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 MBTD1Q05BQ5 628 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 DMP1Q13316 513 aaPredicted RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 PRPF4BQ13523 1007 aaKnown RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 GIT2Q14161 759 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 IL17AQ16552 155 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 FAM187BQ17R55 369 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 NOMO2Q5JPE7 1267 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 HYIQ5T013 277 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 RINT1Q6NUQ1 792 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SLC27A1Q6PCB7 646 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 ZNF572Q7Z3I7 529 aaPredicted RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SYT2Q8N9I0 419 aaPredicted RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 COLGALT1Q8NBJ5 622 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 IFI44Q8TCB0 444 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SPPL3Q8TCT6 385 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 POF1BQ8WVV4 589 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 MRPS27Q92552 414 aaKnown RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 NEIL1Q96FI4 390 aaPredicted RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SLC35A4Q96G79 324 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 TNIP3Q96KP6 325 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 MRGPRX4Q96LA9 322 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 ASB2Q96Q27 587 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 RPS6KC1Q96S38 1066 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 GPHA2Q96T91 129 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 NUP62CLQ9H1M0 184 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 FZD8Q9H461 694 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 CWH43Q9H720 699 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 MINDY3Q9H8M7 445 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 RSAD1Q9HA92 442 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 ALG13Q9NP73 1137 aaKnown RBP5.83□□□□□ -1.48
CPSF7-220ENST00000541963 SPG21Q9NZD8 308 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 LZTS1Q9Y250 596 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 COMMD10Q9Y6G5 202 aa5.83□□□□□ -1.48
CPSF7-220ENST00000541963 NLRC5Q86WI3 1866 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 A0A088AWK7 358 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 A0A1W2PPL8 197 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LRRC14BA6NHZ5 514 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 PP2D1A8MPX8 630 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 AMY1AP04745 511 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 ITGB1P05556 798 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 PRKCBP05771 671 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 LINC00271P0C7V0 271 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 PLA2G4BP0C869 781 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 MTHFD1P11586 935 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 ARF4P18085 180 aaPredicted RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 CDC25AP30304 524 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 DDIT3P35638 169 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 RPS19P39019 145 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 PEX3P56589 373 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 TLE1Q04724 770 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 RESTQ13127 1097 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 MRPL49Q13405 166 aaKnown RBP5.82□□□□□ -1.48
CPSF7-220ENST00000541963 RIN1Q13671 783 aa5.82□□□□□ -1.48
CPSF7-220ENST00000541963 BECN1Q14457 450 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms