RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 UBAP2LQ14157 1087 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 PERM1Q5SV97 790 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 GPR107Q5VW38 600 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 ZNF70Q9UC06 446 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 SF3B1O75533 1304 aaKnown RBP eCLIP15.23■□□□□ 0.034e-6■■■■■ 127.4
SMARCA4-207ENST00000541122 SLITRK3O94933 977 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 ITGALP20701 1170 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 RPL22P35268 128 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 HARS2P49590 506 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 MAMLD1Q13495 774 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 ZNF484Q5JVG2 852 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 PIWIL4Q7Z3Z4 852 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 LZTR1Q8N653 840 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 RTL3Q8N8U3 475 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 CENPIQ92674 756 aaPredicted RBP15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 LGALS13Q9UHV8 139 aa15.23■□□□□ 0.03
SMARCA4-207ENST00000541122 H7C0S8 307 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 CPSF4O95639 269 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 HMBSP08397 361 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ATP5F1P24539 256 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 FBXW4P57775 412 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 DGKKQ5KSL6 1271 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 AKAP14Q86UN6 197 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 FITM2Q8N6M3 262 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 MYDGFQ969H8 173 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 PIF1Q9H611 641 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 LEF1Q9UJU2 399 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 IL6P05231 212 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ODC1P11926 461 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 MYL12AP19105 171 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 RBL1P28749 1068 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 TCF7P36402 384 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ALDH6A1Q02252 535 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 BBS12Q6ZW61 710 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ZFP42Q96MM3 310 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 MTG1Q9BT17 334 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 IL22Q9GZX6 179 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 REEP1Q9H902 201 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 VAV3Q9UKW4 847 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 TMA7Q9Y2S6 64 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 C6orf222P0C671 652 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 CCT3P49368 545 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 PPIL2Q13356 520 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 KCNT2Q6UVM3 1135 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 PIGWQ7Z7B1 504 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ALYREFQ86V81 257 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 C7orf26Q96N11 449 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 SIGLEC16A6NMB1 481 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 A8MUI8 341 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 TNFRSF21O75509 655 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 VAPBO95292 243 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 GJB6O95452 261 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 SERPIND1P05546 499 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 GALK1P51570 392 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 CASP7P55210 303 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ORC1Q13415 861 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 SEZ6Q53EL9 994 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ANGEL2Q5VTE6 544 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ZNF470Q6ECI4 717 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ZNF572Q7Z3I7 529 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 WDR36Q8NI36 951 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 ZHX1-C8orf76Q96EF9 292 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 FBXO6Q9NRD1 293 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 TAS2R13Q9NYV9 303 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 TMEM216Q9P0N5 145 aa15.22■□□□□ 0.03
SMARCA4-207ENST00000541122 HMGCRP04035 888 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 STAG3L1P0CL83 205 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 GJA8P48165 433 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 DENND5AQ6IQ26 1287 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 MZT2AQ6P582 158 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 OTOP1Q7RTM1 612 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 ADCK2Q7Z695 626 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 GSTCDQ8NEC7 633 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 SPPL2AQ8TCT8 520 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 TEKT5Q96M29 485 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 QKIQ96PU8 341 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 ACTR8Q9H981 624 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 ABCB10Q9NRK6 738 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 CHKBQ9Y259 395 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 A0A0A0MRY4 1105 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 CCDC182A6NF36 153 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 ZNF12P17014 697 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 PIK3CGP48736 1102 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 POU6F1Q14863 301 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 ZPBP2Q6X784 338 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 PHF13Q86YI8 300 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 DNAJC19Q96DA6 116 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 SPATA13Q96N96 652 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 VPS45Q9NRW7 570 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 GSTK1Q9Y2Q3 226 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 CSPG5O95196 566 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 RTN3O95197 1032 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 KCNH1O95259 989 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 SLC26A3P40879 764 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 SLC16A1P53985 500 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 KCNK18Q7Z418 384 aa15.21■□□□□ 0.03
SMARCA4-207ENST00000541122 BRSK2Q8IWQ3 736 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms