RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 RNF114Q9Y508 228 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 HEMK1Q9Y5R4 338 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 OAS3Q9Y6K5 1087 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 STON1Q9Y6Q2 735 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 U3KQE9 123 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 CREBBPQ92793 2442 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 PTPRDP23468 1912 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 PLXND1Q9Y4D7 1925 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 SHROOM3Q8TF72 1996 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ABCA12Q86UK0 2595 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 PTPRBP23467 1997 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 A0A1B0GTQ1 180 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 PRR19A6NJB7 356 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 WASH3PC4AMC7 463 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 PRRT4C9JH25 899 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 KCNK3O14649 394 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 YKT6O15498 198 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 COCHO43405 550 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 EPB41L2O43491 1005 aaKnown RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SYNCRIPO60506 623 aaKnown RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SLITRK5O94991 958 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 REC8O95072 547 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 IL18RAPO95256 599 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CISD3P0C7P0 127 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ACADMP11310 421 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 GP1BBP13224 206 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 TYRP14679 529 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 GLDCP23378 1020 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 BDNFP23560 247 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CD27P26842 260 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 TRAPPC10P48553 1259 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ACOT2P49753 483 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CLDN6P56747 220 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ENPP2Q13822 863 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CCDC142Q17RM4 750 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 TTC38Q5R3I4 469 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 HECTD3Q5T447 861 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SNX30Q5VWJ9 437 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ADALQ6DHV7 355 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SLFN12LQ6IEE8 588 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SLC39A4Q6P5W5 647 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF574Q6ZN55 896 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CCDC81Q6ZN84 652 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 HTR3DQ70Z44 454 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 DPH6Q7L8W6 267 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 KCNK18Q7Z418 384 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 LIMS2Q7Z4I7 341 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 OSTM1Q86WC4 334 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 MCATQ8IVS2 390 aaKnown RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 BBS7Q8IWZ6 715 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 MRPL41Q8IXM3 137 aaKnown RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ADGRF2Q8IZF7 708 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 LSMEM2Q8N112 164 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 C4orf32Q8N8J7 132 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 DCBLD1Q8N8Z6 715 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SYT2Q8N9I0 419 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 KCT2Q8NC54 265 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 FAM13CQ8NE31 585 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 PDZD8Q8NEN9 1154 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 OVCA2Q8WZ82 227 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 PRCCQ92733 491 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 MYLPFQ96A32 169 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ERLEC1Q96DZ1 483 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CNDP2Q96KP4 475 aaKnown RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SLITRK1Q96PX8 696 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ELF4Q99607 663 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 MIPEPQ99797 713 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SYT15Q9BQS2 421 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 OSBPL1AQ9BXW6 950 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 DPH1Q9BZG8 443 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CPNE5Q9HCH3 593 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 LRRC4CQ9HCJ2 640 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ANKMY1Q9P2S6 941 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 THAP10Q9P2Z0 257 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 FBXO10Q9UK96 956 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ADAM30Q9UKF2 790 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 AGO2Q9UKV8 859 aaKnown RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 CDH9Q9ULB4 789 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 AGAP1Q9UPQ3 857 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 EFR3BQ9Y2G0 817 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-214ENST00000540865 STYXL1Q9Y6J8 313 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 SLCO1B1Q9Y6L6 691 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 KIAA1549LQ6ZVL6 1849 aa4.86□□□□□ -1.63
SNHG1-214ENST00000540865 TRIP11Q15643 1979 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ANKRD63C9JTQ0 380 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 NEDD8-MDP1E9PL57 170 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 F8VP50 259 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 K7ENM7 598 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CBX4O00257 560 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 VILLO15195 856 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 GSC2O15499 205 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 HCRTO43612 131 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 TSPAN3O60637 253 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 DTNBO60941 627 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 ATP2C2O75185 946 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 LRIG2O94898 1065 aa4.85□□□□□ -1.63
SNHG1-214ENST00000540865 RTN3O95197 1032 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-214ENST00000540865 CST3P01034 146 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms