RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 TUBP50607 506 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 ATXN3P54252 364 aaPredicted RBP17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 USP4Q13107 963 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 TAF11Q15544 211 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 NOMO2Q5JPE7 1267 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 GLB1LQ6UWU2 654 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 PSTKQ8IV42 348 aaKnown RBP17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 ATAD1Q8NBU5 361 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 FAM13CQ8NE31 585 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 LRRC39Q96DD0 335 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 PNPOQ9NVS9 261 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 RBM22Q9NW64 420 aaKnown RBP eCLIP17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 NUMBLQ9Y6R0 609 aa17.47■□□□□ 0.39
EPB41L3-204ENST00000540638 FBXO21O94952 628 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 UPP2O95045 317 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 TBX18O95935 607 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 PDHA1P08559 390 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 TPSB2P20231 275 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 SLC12A2P55011 1212 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 PEX6Q13608 980 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 ZNF460Q14592 562 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 TPSAB1Q15661 275 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 OR6P1Q8NGX9 317 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 SOCS4Q8WXH5 440 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 CENPIQ92674 756 aaPredicted RBP17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 CDH9Q9ULB4 789 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 CCDC22O60826 627 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 ATP5HO75947 161 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 NEK3P51956 506 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 PDE1CQ14123 709 aaPredicted RBP17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 KCNMB4Q86W47 210 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 OR10T2Q8NGX3 314 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 FCRL3Q96P31 734 aaPredicted RBP17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 KLHL5Q96PQ7 755 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 ARHGEF3Q9NR81 526 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 APOBEC2Q9Y235 224 aaKnown RBP17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 A0A096LPK6 155 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 CHRNA4P43681 627 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 FCGRTP55899 365 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 IRF9Q00978 393 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 MPP3Q13368 585 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 MGAT5BQ3V5L5 792 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 ITPRIPL1Q6GPH6 555 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 TTC1Q99614 292 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 DHRS4Q9BTZ2 278 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 WWP1Q9H0M0 922 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 TRPV6Q9H1D0 765 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 FBXW11Q9UKB1 542 aa17.46■□□□□ 0.39
EPB41L3-204ENST00000540638 HACD1B0YJ81 288 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 E9PBE3 544 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 KLHL41O60662 606 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 NMBRP28336 390 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 SLC1A6P48664 564 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 THOC5Q13769 683 aaKnown RBP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 MUM1Q2TAK8 710 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 OTUD1Q5VV17 481 aaPredicted RBP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 LRRC8BQ6P9F7 803 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 MICAL1Q8TDZ2 1067 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 BHMTQ93088 406 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 FCRL2Q96LA5 508 aaPredicted RBP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 C20orf27Q9GZN8 174 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PAGE1O75459 146 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 DGKIO75912 1065 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PRKCHP24723 683 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PTPN4P29074 926 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 CTGFP29279 349 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 SPRP35270 261 aaPredicted RBP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 GP5P40197 560 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 SLC5A3P53794 718 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PRKD1Q15139 912 aaPredicted RBP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PCBP1Q15365 356 aaKnown RBP eCLIP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 LRRC36Q1X8D7 754 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 ZNF280BQ86YH2 543 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 OMDQ99983 421 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PLAC1Q9HBJ0 212 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 SNX15Q9NRS6 342 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 NKX1-2Q9UD57 310 aaPredicted RBP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 HAS3O00219 553 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 ALDOAP04075 364 aaKnown RBP17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 T-ENOLP0DO92 83 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PGFP49763 221 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 SLC18A2Q05940 514 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 TMEM86AQ8N2M4 240 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 MTBPQ96DY7 904 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
EPB41L3-204ENST00000540638 FAM159BA6NKW6 160 aa17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 BPGMP07738 259 aa17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 RALBP11234 206 aa17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 HOXD8P13378 290 aaPredicted RBP17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 ETV4P43268 484 aa17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 ADAM17P78536 824 aa17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 KPNB1Q14974 876 aaKnown RBP17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 C17orf99Q6UX52 265 aa17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 CIR1Q86X95 450 aaPredicted RBP17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 UTP4Q969X6 686 aaKnown RBP17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 NT5MQ9NPB1 228 aa17.44■□□□□ 0.38
EPB41L3-204ENST00000540638 PCDH10Q9P2E7 1040 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms