RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 MYL7Q01449 175 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 CBWD6Q4V339 395 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 CBWD3Q5JTY5 395 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 CBWD5Q5RIA9 395 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 GRTP1Q5TC63 336 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 SPRED2Q7Z698 418 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 RNF135Q8IUD6 432 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 CEP70Q8NHQ1 597 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 TMEM174Q8WUU8 243 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NUSAP1Q9BXS6 441 aaKnown RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 SLITRK6Q9H5Y7 841 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 ARNT2Q9HBZ2 717 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 POLE3Q9NRF9 147 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 DDX43Q9NXZ2 648 aaKnown RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 VPS51Q9UID3 782 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 RPL26L1Q9UNX3 145 aaKnown RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 PCDHA13Q9Y5I0 950 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 FGBP02675 491 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 SELLP14151 372 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 PPARGP37231 505 aaPredicted RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 MAGEA1P43355 309 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 VAMP7P51809 220 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 GNG2P59768 71 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 KCNJ2P63252 427 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 NOP14P78316 857 aaKnown RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 QPCTQ16769 361 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 WSCD2Q2TBF2 565 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 TMEM63BQ5T3F8 832 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 CCNJQ5T5M9 372 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 DPY19L2P1Q6NXN4 242 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 PCYT2Q99447 389 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 NAPGQ99747 312 aaPredicted RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 LACRTQ9GZZ8 138 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 HIPK3Q9H422 1215 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 LIN7BQ9HAP6 207 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 SIX2Q9NPC8 291 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 DTLQ9NZJ0 730 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 UVRAGQ9P2Y5 699 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 POLHQ9Y253 713 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 ADGRA3Q8IWK6 1321 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 RCCD1A6NED2 376 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 EPOPA6NHQ4 379 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 ASB14A6NK59 587 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 ANKRD63C9JTQ0 380 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 MAFO75444 373 aaPredicted RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 PKLRP30613 574 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 VPS41P49754 854 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 PTK2Q05397 1052 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 LPIN1Q14693 890 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 DHRS4L2Q6PKH6 230 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 RHOUQ7L0Q8 258 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 AFG1LQ8WV93 481 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 GLG1Q92896 1179 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 RAB3IPQ96QF0 476 aaPredicted RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 ZPBPQ9BS86 351 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX55-206ENST00000539934 RAB17Q9H0T7 212 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 DHX33Q9H6R0 707 aaKnown RBP12.89□□□□□ -0.35
DDX55-206ENST00000539934 IL23AQ9NPF7 189 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 PCOLCE2Q9UKZ9 415 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 EMSYQ7Z589 1322 aa12.89□□□□□ -0.35
DDX55-206ENST00000539934 SH3D21A4FU49 640 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 RAD51BO15315 384 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 DUSP11O75319 330 aaKnown RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 DNAJB5O75953 348 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 PIM1P11309 404 aaPredicted RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 SOX5P35711 763 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 DLG4P78352 724 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 RAB30Q15771 203 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 CNGA2Q16280 664 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 ASTE1Q2TB18 679 aaPredicted RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 CCDC28AQ8IWP9 274 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 ZSWIM2Q8NEG5 633 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 POMGNT1Q8WZA1 660 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 CIDECQ96AQ7 238 aaPredicted RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 HS6ST2Q96MM7 605 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 C1QTNF1Q9BXJ1 281 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 RNF38Q9H0F5 515 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 MRPL40Q9NQ50 206 aaKnown RBP12.88□□□□□ -0.35
DDX55-206ENST00000539934 FBXO10Q9UK96 956 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 CAPN8A6NHC0 703 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 CHURC1-FNTBB4DL54 471 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 AQP9O43315 295 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 PEX11AO75192 247 aa12.88□□□□□ -0.35
DDX55-206ENST00000539934 TXNP10599 105 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms