RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 CXorf57Q6NSI4 855 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 LRSAM1Q6UWE0 723 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 LAYNQ6UX15 382 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 KDM1BQ8NB78 822 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OR52K2Q8NGK3 314 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 EPS8L1Q8TE68 723 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NPY6RQ99463 290 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PCED1AQ9H1Q7 454 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 WDCPQ9H6R7 721 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GAREM1Q9H706 876 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 IL21RQ9HBE5 538 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ANLNQ9NQW6 1124 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TMPRSS4Q9NRS4 437 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RRN3Q9NYV6 651 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ITIH6Q6UXX5 1313 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 EPHB6O15197 1021 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 BNIP3LO60238 219 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SH3BP5O60239 455 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 LSM8O95777 96 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 IL1BP01584 269 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZNF18P17022 549 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC8A1P32418 973 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FLT3P36888 993 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GABRB2P47870 512 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OXCT1P55809 520 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FAM193AP78312 1265 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SHC2P98077 582 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 BNC1Q01954 994 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SULT2A1Q06520 285 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 STX1AQ16623 288 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ST3GAL2Q16842 350 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 BRMS1LQ5PSV4 323 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RBM43Q6ZSC3 357 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PHLDB2Q86SQ0 1253 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PTPRN2Q92932 1015 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZDHHC5Q9C0B5 715 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NEUROG2Q9H2A3 272 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ANO10Q9NW15 660 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 VPS28Q9UK41 221 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SCML1Q9UN30 329 aa13.12□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 UPK3BL1B0FP48 263 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 UPK3BL2E5RIL1 263 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CLDN11O75508 207 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GJB3O75712 270 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CNTN5O94779 1100 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CER1O95813 267 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SOX5P35711 763 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CXCR3P49682 368 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 AFF3P51826 1226 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PLK1P53350 603 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 COPB1P53618 953 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GALCP54803 685 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NOMO3P69849 1222 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SFSWAPQ12872 951 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 MTA1Q13330 715 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NUMA1Q14980 2115 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SYCP1Q15431 976 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TEAD4Q15561 434 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 HLA-BQ31612 363 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC25A52Q3SY17 297 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 POM121L1PQ3SYA9 428 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ALFQ53S48 1182 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 KIAA0895LQ68EN5 471 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NCEH1Q6PIU2 408 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TFAP2DQ7Z6R9 452 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ADAT2Q7Z6V5 191 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NAXDQ8IW45 347 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 EMC1Q8N766 993 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ANKRD20A12PQ8NF67 263 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 C1orf216Q8TAB5 229 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC30A5Q8TAD4 765 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SETD7Q8WTS6 366 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FAM129BQ96TA1 746 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FEM1AQ9BSK4 669 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ARHGEF38Q9NXL2 777 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NOCTQ9UK39 431 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FNDC3AQ9Y2H6 1198 aaKnown RBP13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PCDHB9Q9Y5E1 797 aa13.11□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 LRRC72A6NJI9 287 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 I6L893 689 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PLK4O00444 970 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 HYAL3O43820 417 aaPredicted RBP13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SRGAP2O75044 1071 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ADH1BP00325 375 aa13.1□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 F9P00740 461 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms