RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 GDF3Q9NR23 364 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 ZNF212Q9UDV6 495 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 NEU2Q9Y3R4 380 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 A0A1B0GVM2 712 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 TCAF2A6NFQ2 919 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 BHMG1C9JSJ3 638 aaPredicted RBP16.58■□□□□ 0.24
TRAF3-204ENST00000539721 CLDN11O75508 207 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 TUBBP07437 444 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 VAV1P15498 845 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 TCF3P15923 654 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 WEE1P30291 646 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 CHKAP35790 457 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 GARSP41250 739 aaKnown RBP16.58■□□□□ 0.24
TRAF3-204ENST00000539721 NDST2P52849 883 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 PRPF38BQ5VTL8 546 aaKnown RBP16.58■□□□□ 0.24
TRAF3-204ENST00000539721 AFMIDQ63HM1 303 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 CHST9Q7L1S5 443 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 ATPAF2Q8N5M1 289 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 CELF5Q8N6W0 485 aaKnown RBP16.58■□□□□ 0.24
TRAF3-204ENST00000539721 TDRD5Q8NAT2 981 aaKnown RBP16.58■□□□□ 0.24
TRAF3-204ENST00000539721 RIN3Q8TB24 985 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 IFT81Q8WYA0 676 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 HDAC11Q96DB2 347 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 FERMT1Q9BQL6 677 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 S1PR5Q9H228 398 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 USP29Q9HBJ7 922 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 RAB21Q9UL25 225 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 SNX24Q9Y343 169 aa16.58■□□□□ 0.24
TRAF3-204ENST00000539721 TBL1XO60907 577 aa16.57■□□□□ 0.24
TRAF3-204ENST00000539721 ZSCAN5DPP0CG00 497 aa16.57■□□□□ 0.24
TRAF3-204ENST00000539721 PPIDQ08752 370 aaKnown RBP16.57■□□□□ 0.24
TRAF3-204ENST00000539721 DEPDC1BQ8WUY9 529 aa16.57■□□□□ 0.24
TRAF3-204ENST00000539721 HTR3CQ8WXA8 447 aa16.57■□□□□ 0.24
TRAF3-204ENST00000539721 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
TRAF3-204ENST00000539721 RIPOR3Q96MK2 946 aa16.57■□□□□ 0.24
TRAF3-204ENST00000539721 NOL6Q9H6R4 1146 aaKnown RBP16.57■□□□□ 0.24
TRAF3-204ENST00000539721 FAM114A2Q9NRY5 505 aa16.57■□□□□ 0.24
TRAF3-204ENST00000539721 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 RASA4BC9J798 803 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 GFRA2O00451 464 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 RASA4O43374 803 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 RAMP2O60895 175 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ZNF189O75820 626 aaPredicted RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ACTN2P35609 894 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ADCY8P40145 1251 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 RPL21P46778 160 aaKnown RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ZNF177Q13360 481 aaPredicted RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 TRADDQ15628 312 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 SEC14L1Q92503 715 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 PABPC5Q96DU9 382 aaKnown RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 RTP4Q96DX8 246 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 P2RY11Q96G91 374 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 GDE1Q9NZC3 331 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 SEPT10Q9P0V9 454 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ARHGAP42A6NI28 874 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 STK10O94804 968 aaKnown RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 TNFRSF8P28908 595 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 PAPOLAP51003 745 aaKnown RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 NRLP54845 237 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 GPS1Q13098 491 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 CUL1Q13616 776 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 POLD3Q15054 466 aaPredicted RBP16.56■□□□□ 0.24
TRAF3-204ENST00000539721 MPPE1Q53F39 396 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 FAM78AQ5JUQ0 283 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 C6orf118Q5T5N4 469 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ARHGAP36Q6ZRI8 547 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 TPGS1Q6ZTW0 290 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ZNF354CQ86Y25 554 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 CCDC13Q8IYE1 715 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 CARNMT1Q8N4J0 409 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 DDI1Q8WTU0 396 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 SMARCD2Q92925 531 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 HMCESQ96FZ2 354 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 SNF8Q96H20 258 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 ASB16Q96NS5 453 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 TBC1D14Q9P2M4 693 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 CDH7Q9ULB5 785 aa16.56■□□□□ 0.24
TRAF3-204ENST00000539721 DENND4AQ7Z401 1863 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 H0Y626 953 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 DYNC1I1O14576 645 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 RHOCP08134 193 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 RPL22P35268 128 aaKnown RBP16.55■□□□□ 0.24
TRAF3-204ENST00000539721 LTBRP36941 435 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 MTHFRP42898 656 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 CARSP49589 748 aaKnown RBP16.55■□□□□ 0.24
TRAF3-204ENST00000539721 DRG2P55039 364 aaKnown RBP16.55■□□□□ 0.24
TRAF3-204ENST00000539721 YBEYP58557 167 aaPredicted RBP16.55■□□□□ 0.24
TRAF3-204ENST00000539721 ZNF33AQ06730 810 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 HLTFQ14527 1009 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRAF3-204ENST00000539721 P3H1Q32P28 736 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 PARP15Q460N3 678 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 CCNI2Q6ZMN8 369 aaPredicted RBP16.55■□□□□ 0.24
TRAF3-204ENST00000539721 LRRC49Q8IUZ0 686 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 BHMTQ93088 406 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 CHD5Q8TDI0 1954 aa16.55■□□□□ 0.24
TRAF3-204ENST00000539721 RNF103O00237 685 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 MTSS1O43312 755 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 CYBBP04839 570 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 CCNCP24863 283 aa16.54■□□□□ 0.24
TRAF3-204ENST00000539721 VIPR2P41587 438 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms