RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 IL1BP01584 269 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 NFKB1P19838 968 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 GCKP35557 465 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 FDFT1P37268 417 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ATXN3P54252 364 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 CCNA1P78396 465 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 SARNPP82979 210 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 RNF220Q5VTB9 566 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 RNF111Q6ZNA4 994 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ZMIZ2Q8NF64 920 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 CDKL2Q92772 493 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 MARK4Q96L34 752 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 PTPN18Q99952 460 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 WDR6Q9NNW5 1121 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 IARS2Q9NSE4 1012 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 MKS1Q9NXB0 559 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 MKI67P46013 3256 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 TK2O00142 265 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ZBTB14O43829 449 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 GLRA3O75311 464 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 DAB1O75553 588 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 AP1G2O75843 785 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 TM7SF2O76062 418 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 SERPINA6P08185 405 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 SRGAP2BP0DMP2 458 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 RALBP11234 206 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 NMBRP28336 390 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 TSNAXIP1Q2TAA8 658 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 RAPH1Q70E73 1250 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 WNT8BQ93098 351 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 FAM136AQ96C01 138 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 PCED1BQ96HM7 432 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 HSFY1Q96LI6 401 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 WDR55Q9H6Y2 383 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 VANGL2Q9ULK5 521 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 DICER1Q9UPY3 1922 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 NRCAMQ92823 1304 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 F8W810 466 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 HNRNPCL1O60812 293 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 OPHN1O60890 802 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ZCCHC18P0CG32 403 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ANPEPP15144 967 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 NOS2P35228 1153 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 CLCNKBP51801 687 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 TPI1P60174 286 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 MFSD10Q14728 455 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 PPM1LQ5SGD2 360 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ZNF280DQ6N043 979 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 TIFABQ6ZNK6 161 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 WDR75Q8IWA0 830 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 TRIM42Q8IWZ5 723 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 OR52B2Q96RD2 323 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 GAD1Q99259 594 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ATXN3LQ9H3M9 355 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 STX18Q9P2W9 335 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 DERAQ9Y315 318 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 ZCWPW2A0A1B0GU75 182 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 A6NHS1 94 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 ZNF195O14628 629 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 BIRC5O15392 142 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 MT-CYBP00156 380 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-210ENST00000539599 JCHAINP01591 159 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 POLBP06746 335 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 ACADSP16219 412 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 ADRA1BP35368 520 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 RPL34P49207 117 aaKnown RBP14.38□□□□□ -0.11
UBE3B-210ENST00000539599 PGFP49763 221 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 PDK1Q15118 436 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 LDLRAD1Q5T700 205 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 LPCAT4Q643R3 524 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 IZUMO2Q6UXV1 221 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 KYAT3Q6YP21 454 aaKnown RBP14.38□□□□□ -0.11
UBE3B-210ENST00000539599 FRMD7Q6ZUT3 714 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 TLK2Q86UE8 772 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 HPS6Q86YV9 775 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 ZNF560Q96MR9 790 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
UBE3B-210ENST00000539599 SIK2Q9H0K1 926 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 BATF3Q9NR55 127 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 GDAP2Q9NXN4 497 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 GTF2IRD1Q9UHL9 959 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 A0A096LPK6 155 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 ACADSBP45954 432 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 GLUD2P49448 558 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 NAIF1Q69YI7 327 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-210ENST00000539599 PDPK2PQ6A1A2 396 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 TUBB6Q9BUF5 446 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 ABHD16BQ9H3Z7 469 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 C20orf96Q9NUD7 363 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-210ENST00000539599 SLC39A10Q9ULF5 831 aa14.38□□□□□ -0.11
UBE3B-210ENST00000539599 APOBEC2Q9Y235 224 aaKnown RBP14.38□□□□□ -0.11
UBE3B-210ENST00000539599 F2P00734 622 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 CD4P01730 458 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 SERPINE1P05121 402 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 JUNP05412 331 aaKnown RBP14.37□□□□□ -0.11
UBE3B-210ENST00000539599 CPA3P15088 417 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 MPSTP25325 297 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 GP5P40197 560 aa14.37□□□□□ -0.11
UBE3B-210ENST00000539599 RAP1GDS1P52306 607 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms