RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PRKCGP05129 697 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 TPH1P17752 444 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 GNAZP19086 355 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 PCSK1P29120 753 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 GARSP41250 739 aaKnown RBP25.47■■□□□ 1.67
RAB40C-204ENST00000538492 STXBP5Q5T5C0 1151 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 STRA8Q7Z7C7 330 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 RSPH3Q86UC2 560 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 TAC4Q86UU9 113 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 FBXO27Q8NI29 283 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 ZNF778Q96MU6 729 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 CPNE1Q99829 537 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 MTG1Q9BT17 334 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-204ENST00000538492 DNAJC16Q9Y2G8 782 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 SRGAP2BP0DMP2 458 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 SLC1A6P48664 564 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 CXCR3P49682 368 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 KDSRQ06136 332 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 TEDDM1Q5T9Z0 273 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 DCLK2Q8N568 766 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 TEX9Q8N6V9 391 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 HDAC11Q96DB2 347 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 GBA3Q9H227 469 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 SNX15Q9NRS6 342 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 BPTFQ12830 3046 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 DUSP11O75319 330 aaKnown RBP25.46■■□□□ 1.67
RAB40C-204ENST00000538492 F9P00740 461 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 MYCNP04198 464 aaPredicted RBP25.46■■□□□ 1.67
RAB40C-204ENST00000538492 HSP90AA5PQ58FG0 334 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 KCTD11Q693B1 232 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 TMLHEQ9NVH6 421 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 GIT1Q9Y2X7 761 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 RAD54BQ9Y620 910 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 MRPL42Q9Y6G3 142 aaKnown RBP25.46■■□□□ 1.67
RAB40C-204ENST00000538492 ZCWPW2A0A1B0GU75 182 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 B2RBV5 119 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 JCHAINP01591 159 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 MX2P20592 715 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 GALNT2Q10471 571 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 GRTP1Q5TC63 336 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 ATG14Q6ZNE5 492 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 TMEM135Q86UB9 458 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 TMEM209Q96SK2 561 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 CASS4Q9NQ75 786 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 CHST12Q9NRB3 414 aa25.46■■□□□ 1.67
RAB40C-204ENST00000538492 CCDC78A2IDD5 438 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 ARHGAP42A6NI28 874 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 PROCP04070 461 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 UBAP2LQ14157 1087 aaKnown RBP25.45■■□□□ 1.66
RAB40C-204ENST00000538492 KPNB1Q14974 876 aaKnown RBP25.45■■□□□ 1.66
RAB40C-204ENST00000538492 ANKRD20A4Q4UJ75 823 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 FAM91A1Q658Y4 838 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 RWDD4Q6NW29 188 aaKnown RBP25.45■■□□□ 1.66
RAB40C-204ENST00000538492 PIWIL2Q8TC59 973 aaKnown RBP25.45■■□□□ 1.66
RAB40C-204ENST00000538492 USP33Q8TEY7 942 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 SIK2Q9H0K1 926 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 CAB39LQ9H9S4 337 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 CSNK1G1Q9HCP0 422 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 CHRAC1Q9NRG0 131 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 ODC1P11926 461 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 CD52P31358 61 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 KIRREL3Q8IZU9 778 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 TNS4Q8IZW8 715 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 ENDOVQ8N8Q3 282 aaKnown RBP25.45■■□□□ 1.66
RAB40C-204ENST00000538492 SCAMP5Q8TAC9 235 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 RBBP8Q99708 897 aa25.45■■□□□ 1.66
RAB40C-204ENST00000538492 GOLGA8TH3BQL2 631 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 MGEA5O60502 916 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 CTGFP29279 349 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 SERPINB6P35237 376 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 FSTL4Q6MZW2 842 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 RASAL3Q86YV0 1011 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 WDR75Q8IWA0 830 aaKnown RBP25.44■■□□□ 1.66
RAB40C-204ENST00000538492 PLD6Q8N2A8 252 aaKnown RBP25.44■■□□□ 1.66
RAB40C-204ENST00000538492 RRN3Q9NYV6 651 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 RPL26L1Q9UNX3 145 aaKnown RBP25.44■■□□□ 1.66
RAB40C-204ENST00000538492 INPP5FQ9Y2H2 1132 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 SCN10AQ9Y5Y9 1956 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 PRR5-ARHGAP8B1AHC4 643 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 IGHA2P01877 340 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 RPL9P32969 192 aaKnown RBP25.44■■□□□ 1.66
RAB40C-204ENST00000538492 ARHGAP8P85298 464 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 DLG2Q15700 870 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 SOCS4Q8WXH5 440 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 COPG2Q9UBF2 871 aa25.44■■□□□ 1.66
RAB40C-204ENST00000538492 USP1O94782 785 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 CLNS1AP54105 237 aaKnown RBP25.43■■□□□ 1.66
RAB40C-204ENST00000538492 DQX1Q8TE96 717 aaKnown RBP25.43■■□□□ 1.66
RAB40C-204ENST00000538492 WDR60Q8WVS4 1066 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 YY1AP1Q9H869 796 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 TRHDEQ9UKU6 1024 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 PADI3Q9ULW8 664 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 MTSS1O43312 755 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 ARRB2P32121 409 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 SPRP35270 261 aaPredicted RBP25.43■■□□□ 1.66
RAB40C-204ENST00000538492 PGM1P36871 562 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 THPOP40225 353 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 CCNG1P51959 295 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 ITPRIPL1Q6GPH6 555 aa25.43■■□□□ 1.66
RAB40C-204ENST00000538492 ARHGAP36Q6ZRI8 547 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms