RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 NOMO1Q15155 1222 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RNF219Q5W0B1 726 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TIGD7Q6NT04 549 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SYDE1Q6ZW31 735 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MTSS1LQ765P7 747 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 B4GALNT4Q76KP1 1039 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CHST9Q7L1S5 443 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MFN1Q8IWA4 741 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IFT20Q8IY31 132 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BBS5Q8N3I7 341 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CPXM2Q8N436 756 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZNF557Q8N988 423 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NETO2Q8NC67 525 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HLA-CQ95604 372 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 WBP2Q969T9 261 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LRRC45Q96CN5 670 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZFRQ96KR1 1074 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GUCD1Q96NT3 240 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 XPO6Q96QU8 1125 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PRMT1Q99873 361 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TMEM121Q9BTD3 319 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LRRC1Q9BTT6 524 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BBS2Q9BXC9 721 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TRIM31Q9BZY9 425 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 S1PR5Q9H228 398 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ETNK2Q9NVF9 386 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TMEM248Q9NWD8 314 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CDH22Q9UJ99 828 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NR2E1Q9Y466 385 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 USP15Q9Y4E8 981 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 WNT6Q9Y6F9 365 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BRWD1Q9NSI6 2320 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CDH23Q9H251 3354 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DOCK6Q96HP0 2047 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RASA4BC9J798 803 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 E7EVH7 732 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NEDD8-MDP1E9PL57 170 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 I6L893 689 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NDC80O14777 642 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DCLK1O15075 740 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TTI1O43156 1089 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RASA4O43374 803 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HEXIM1O94992 359 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LUC7L3O95232 432 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ITGAVP06756 1048 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LAMP2P13473 410 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 WEE1P30291 646 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 VPS41P49754 854 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PAPOLAP51003 745 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 YBEYP58557 167 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MRPS25P82663 173 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GUCY2DQ02846 1103 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GAD2Q05329 585 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ITKQ08881 620 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CALCOCO2Q13137 446 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HLTFQ14527 1009 aaKnown RBP eCLIP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PDGFRLQ15198 375 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TRIP13Q15645 432 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ERCC6LQ2NKX8 1250 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ALFQ53S48 1182 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC45A4Q5BKX6 768 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FAM133BQ5BKY9 247 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 Q6ZNB5 142 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ARHGEF18Q6ZSZ5 1173 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SETD3Q86TU7 594 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LRRC49Q8IUZ0 686 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CCDC13Q8IYE1 715 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PAF1Q8N7H5 531 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FAM71DQ8N9W8 422 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 C12orf50Q8NA57 414 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NOA1Q8NC60 698 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BBOF1Q8ND07 529 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ST13P5Q8NFI4 369 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MYRIPQ8NFW9 859 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CSGALNACT1Q8TDX6 532 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IFT81Q8WYA0 676 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ATP2A3Q93084 1043 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ASB16Q96NS5 453 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HERPUD2Q9BSE4 406 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC39A8Q9C0K1 460 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MAGEH1Q9H213 219 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LINC00597Q9H2U6 94 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 POMKQ9H5K3 350 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 C10orf88Q9H8K7 445 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ATP13A1Q9HD20 1204 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SPHK2Q9NRA0 654 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 OBP2AQ9NY56 170 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PLK2Q9NYY3 685 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DTLQ9NZJ0 730 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KIAA1522Q9P206 1035 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KLHL8Q9P2G9 620 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MFHAS1Q9Y4C4 1052 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TTLL3Q9Y4R7 772 aa10.93□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IGLV3-10A0A075B6K4 115 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 UQCRHLA0A096LP55 91 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 WASH4PA8MWX3 477 aa10.92□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RAD51CO43502 376 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms