RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 DHCR24Q15392 516 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ZBTB6Q15916 424 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 BOLA3Q53S33 107 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 FAM72AQ5TYM5 149 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 FAM72DQ6L9T8 149 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 RBM43Q6ZSC3 357 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 FAM72BQ86X60 149 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 CRYBG2Q8N1P7 616 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 TSEN2Q8NCE0 465 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 FUBP3Q96I24 572 aaKnown RBP eCLIP7.42□□□□□ -1.22
MSH6-209ENST00000538136 P2RY13Q9BPV8 354 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 C2orf49Q9BVC5 232 aaPredicted RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 RAPGEFL1Q9UHV5 662 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 NR2E1Q9Y466 385 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 CLUHO75153 1309 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 KCNU1A8MYU2 1149 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 DNAJC6O75061 913 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 SYF2O95926 243 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 PAK4O96013 591 aaPredicted RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 POLBP06746 335 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 PYGMP11217 842 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 PFKPQ01813 784 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 NSUN2Q08J23 767 aaKnown RBP eCLIP7.42□□□□□ -1.22
MSH6-209ENST00000538136 MBLAC2Q68D91 279 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 VITQ6UXI7 678 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 NAPRTQ6XQN6 538 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 TMPRSS6Q8IU80 811 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 CAMK1DQ8IU85 385 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 C3orf20Q8ND61 904 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ETNK2Q9NVF9 386 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 IL1RAPL1Q9NZN1 696 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 AGO1Q9UL18 857 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 MRPS17Q9Y2R5 130 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 HCN4Q9Y3Q4 1203 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 PIEZO2Q9H5I5 2752 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 FAM208BQ5VWN6 2430 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 SPTBN1Q01082 2364 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 VPS13AQ96RL7 3174 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 FSD2A1L4K1 749 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 GTPBP10A4D1E9 387 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 MTX2O75431 263 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ETF1P62495 437 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 ITIH3Q06033 890 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 OLIG2Q13516 323 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ZNF268Q14587 947 aaPredicted RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 DUSP6Q16828 381 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 SLC8B1Q6J4K2 584 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 PAQR9Q6ZVX9 377 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 SFTPA1Q8IWL2 248 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 HDDC3Q8N4P3 179 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 C2orf73Q8N5S3 287 aaPredicted RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 SPATA22Q8NHS9 363 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ATOH1Q92858 354 aaPredicted RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 BORCS6Q96GS4 357 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 GPR174Q9BXC1 333 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 PRKAB1Q9Y478 270 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 PTPRQQ9UMZ3 2332 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 TCRBV21S2A2A0A5A6 115 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 E9PAM4 449 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 CD86P42081 329 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SLC12A2P55011 1212 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 C1orf61Q13536 156 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 TDGQ13569 410 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 PDGFRLQ15198 375 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 CCDC14Q49A88 953 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SLC44A4Q53GD3 710 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 THEMIS2Q5TEJ8 643 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 RAPH1Q70E73 1250 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 TCEAL8Q8IYN2 117 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SETD7Q8WTS6 366 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 SLC35F5Q8WV83 523 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 RBM15Q96T37 977 aaKnown RBP eCLIP7.41□□□□□ -1.228e-10■■□□□ 12.9
MSH6-209ENST00000538136 TRIM62Q9BVG3 475 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 PHF7Q9BWX1 381 aaPredicted RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 KCNF1Q9H3M0 494 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 PRDM16Q9HAZ2 1276 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 EPB41L5Q9HCM4 733 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SCUBE2Q9NQ36 999 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 OLA1Q9NTK5 396 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 UBA2Q9UBT2 640 aaPredicted RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 UTP11Q9Y3A2 253 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 NME7Q9Y5B8 376 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 MAST2Q6P0Q8 1798 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 A0A1W2PP55 124 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 EIF3CLB5ME19 914 aaKnown RBP7.41□□□□□ -1.22
MSH6-209ENST00000538136 STC2O76061 302 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SERPIND1P05546 499 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 RBL1P28749 1068 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 IRAK1P51617 712 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 IL9RQ01113 521 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 NOMO1Q15155 1222 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 COBLL1Q53SF7 1204 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 C6orf118Q5T5N4 469 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 ADGRF1Q5T601 910 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 IER5LQ5T953 404 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 ADCK2Q7Z695 626 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 SCD5Q86SK9 330 aa7.41□□□□□ -1.22
MSH6-209ENST00000538136 PPP1R14CQ8TAE6 165 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms