RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 NTSR1P30989 418 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 HNRNPH3P31942 346 aaKnown RBP18.53■□□□□ 0.56
CCDC61-201ENST00000536603 CD70P32970 193 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 MAPK8P45983 427 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 LMAN2Q12907 356 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 MAMLD1Q13495 774 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 CDH18Q13634 790 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 RABGAP1LQ5R372 815 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 PLEKHA7Q6IQ23 1121 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 SDE2Q6IQ49 451 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 STRADAQ7RTN6 431 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 KIAA0907Q7Z7F0 614 aaPredicted RBP18.53■□□□□ 0.56
CCDC61-201ENST00000536603 CIR1Q86X95 450 aaPredicted RBP18.53■□□□□ 0.56
CCDC61-201ENST00000536603 TMEFF1Q8IYR6 380 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCDC61-201ENST00000536603 ZNF557Q8N988 423 aaPredicted RBP18.53■□□□□ 0.56
CCDC61-201ENST00000536603 DEFB124Q8NES8 71 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 WFIKKN2Q8TEU8 576 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 FAM172AQ8WUF8 416 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 HMGB4Q8WW32 186 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 CENPIQ92674 756 aaPredicted RBP18.53■□□□□ 0.56
CCDC61-201ENST00000536603 IGSF8Q969P0 613 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 ISCUQ9H1K1 167 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 SLC32A1Q9H598 525 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 PARVAQ9NVD7 372 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 CACNA2D2Q9NY47 1150 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 CNOT8Q9UFF9 292 aaKnown RBP18.53■□□□□ 0.56
CCDC61-201ENST00000536603 ZFHX4Q86UP3 3567 aa18.53■□□□□ 0.56
CCDC61-201ENST00000536603 A0A087X0T9 212 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 WASH3PC4AMC7 463 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 FAM228BP0C875 321 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 ZNF143P52747 638 aaPredicted RBP18.52■□□□□ 0.56
CCDC61-201ENST00000536603 ADKP55263 362 aaKnown RBP18.52■□□□□ 0.56
CCDC61-201ENST00000536603 BYSLQ13895 437 aaKnown RBP18.52■□□□□ 0.56
CCDC61-201ENST00000536603 EIF4HQ15056 248 aaKnown RBP18.52■□□□□ 0.56
CCDC61-201ENST00000536603 TSR1Q2NL82 804 aaKnown RBP18.52■□□□□ 0.56
CCDC61-201ENST00000536603 FSCBQ5H9T9 825 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 ADIPOR2Q86V24 386 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 DRC7Q8IY82 874 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 AHI1Q8N157 1196 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 CCAR2Q8N163 923 aaKnown RBP18.52■□□□□ 0.56
CCDC61-201ENST00000536603 SORCS1Q8WY21 1168 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 ZNF653Q96CK0 615 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 C1orf74Q96LT6 269 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 HAPLN3Q96S86 360 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 DNAJC7Q99615 494 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 SCNM1Q9BWG6 230 aa18.52■□□□□ 0.56
CCDC61-201ENST00000536603 THAP10Q9P2Z0 257 aaPredicted RBP18.52■□□□□ 0.56
CCDC61-201ENST00000536603 CFAP47Q6ZTR5 3102 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 CCP110O43303 1012 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 TOP3BO95985 862 aaKnown RBP18.51■□□□□ 0.55
CCDC61-201ENST00000536603 HOXB2P14652 356 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 EIF4A3P38919 411 aaKnown RBP18.51■□□□□ 0.55
CCDC61-201ENST00000536603 P2RY2P41231 377 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 IRAK1P51617 712 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 HDAC4P56524 1084 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 ARID5BQ14865 1188 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 ARL13BQ3SXY8 428 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 TTC39BQ5VTQ0 682 aaPredicted RBP18.51■□□□□ 0.55
CCDC61-201ENST00000536603 MBLAC2Q68D91 279 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 CYB5D2Q8WUJ1 264 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 ERLEC1Q96DZ1 483 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 LMLNQ96KR4 655 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 ZNHIT6Q9NWK9 470 aaKnown RBP18.51■□□□□ 0.55
CCDC61-201ENST00000536603 MYO1AQ9UBC5 1043 aa18.51■□□□□ 0.55
CCDC61-201ENST00000536603 EVLQ9UI08 416 aaPredicted RBP18.51■□□□□ 0.55
CCDC61-201ENST00000536603 A0A1B0GVM2 712 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 TCRBV21S2A2A0A5A6 115 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 TCAF2A6NFQ2 919 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 SRGAP2O75044 1071 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 MFAP3LO75121 409 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 CFIP05156 583 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 MYBL1P10243 752 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 POLR2EP19388 210 aaKnown RBP18.5■□□□□ 0.55
CCDC61-201ENST00000536603 ADRA1BP35368 520 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 IL12RB1P42701 662 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 ATXN3P54252 364 aaPredicted RBP18.5■□□□□ 0.55
CCDC61-201ENST00000536603 OGDHQ02218 1023 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 ZNF234Q14588 700 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 C5orf22Q49AR2 442 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 CCDC122Q5T0U0 273 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 ACBD5Q5T8D3 534 aaPredicted RBP18.5■□□□□ 0.55
CCDC61-201ENST00000536603 KIAA1211LQ6NV74 962 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 LRRC31Q6UY01 552 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 SYT12Q8IV01 421 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 ZNF683Q8IZ20 524 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 FRMD1Q8N878 549 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 TC2NQ8N9U0 490 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 TRIM11Q96F44 468 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 GABRG3Q99928 467 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 CNPY3Q9BT09 278 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 ABHD10Q9NUJ1 306 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 KIAA1522Q9P206 1035 aaPredicted RBP18.5■□□□□ 0.55
CCDC61-201ENST00000536603 INTS6Q9UL03 887 aaKnown RBP18.5■□□□□ 0.55
CCDC61-201ENST00000536603 PLA2G4CQ9UP65 541 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 RAD54BQ9Y620 910 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 STON1Q9Y6Q2 735 aa18.5■□□□□ 0.55
CCDC61-201ENST00000536603 ATXN2Q99700 1313 aaKnown RBP18.49■□□□□ 0.55
CCDC61-201ENST00000536603 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.49■□□□□ 0.55
CCDC61-201ENST00000536603 A0A1W2PQF6 199 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms