RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ACBD5Q5T8D3 534 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 RFWD3Q6PCD5 774 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 C19orf48Q6RUI8 117 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 IL27RAQ6UWB1 636 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 TRIM72Q6ZMU5 477 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 ERICH1Q86X53 443 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 XYLT1Q86Y38 959 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 AHI1Q8N157 1196 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 RHBDD1Q8TEB9 315 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 PRICKLE1Q96MT3 831 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 TMEM245Q9H330 911 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 CCDC86Q9H6F5 360 aaKnown RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 C6orf106Q9H6K1 298 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 RTN4Q9NQC3 1192 aaKnown RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 SLC12A6Q9UHW9 1150 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 TMEM59LQ9UK28 342 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 GPSM3Q9Y4H4 160 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 LOC400499M0QZD8 3231 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 NBEAQ8NFP9 2946 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 CABIN1Q9Y6J0 2220 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 SMG1Q96Q15 3661 aaKnown RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 TBL1XO60907 577 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 ENDOD1O94919 500 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 F9P00740 461 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 MMEP08473 750 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 DLDP09622 509 aaKnown RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 PABPC1P11940 636 aaKnown RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 UNGP13051 313 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 CDK11BP21127 795 aaKnown RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 MMP8P22894 467 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 CXCR3P49682 368 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 GSCP56915 257 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 FMO1Q01740 532 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 UBXN1Q04323 297 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 IQCB1Q15051 598 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 PTPRNQ16849 979 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 KIF19Q2TAC6 998 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 SLC25A52Q3SY17 297 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 OTUD1Q5VV17 481 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 CAVIN1Q6NZI2 390 aaKnown RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 CHST9Q7L1S5 443 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 AOPEPQ8N6M6 819 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 ATP6V0D2Q8N8Y2 350 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 BAHD1Q8TBE0 780 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 MDM1Q8TC05 714 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 WFDC5Q8TCV5 224 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 MYEOVQ96EZ4 313 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 ABCB8Q9NUT2 735 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 DDIT4Q9NX09 232 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 TOR4AQ9NXH8 423 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 ARHGEF38Q9NXL2 777 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 KIAA1522Q9P206 1035 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-207ENST00000536483 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 PLA2G4CQ9UP65 541 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 SNX11Q9Y5W9 270 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 PLXNB3Q9ULL4 1909 aa12.85□□□□□ -0.35
PRKDC-207ENST00000536483 ACACAQ13085 2346 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 A0A1W2PQC6 194 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 GOLGA8CPA6NN73 597 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 KCNK3O14649 394 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 FLRT2O43155 660 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 GFPT2O94808 682 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 ATP5BP06576 529 aaKnown RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 ATXN1LP0C7T5 689 aaKnown RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 ABCB4P21439 1286 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 TACR2P21452 398 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 ZNF165P49910 485 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 PLK1P53350 603 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 RPS14P62263 151 aaKnown RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 RPS24P62847 133 aaKnown RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 ACAP1Q15027 740 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 BRMS1LQ5PSV4 323 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 TMPRSS7Q7RTY8 843 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 MSANTD4Q8NCY6 345 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 NEK11Q8NG66 645 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 C1orf74Q96LT6 269 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 SPAG5Q96R06 1193 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 CDC6Q99741 560 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 BTBD1Q9H0C5 482 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 PDCL3Q9H2J4 239 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 SYNCQ9H7C4 482 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 FBRSQ9HAH7 460 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 PRSS16Q9NQE7 514 aa12.84□□□□□ -0.35
PRKDC-207ENST00000536483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 XPO7Q9UIA9 1087 aaKnown RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
PRKDC-207ENST00000536483 STAP1Q9ULZ2 295 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms