RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CDC25CP30307 473 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 SERPINB8P50452 374 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 SESN3P58005 492 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 PPARDQ03181 441 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 GABPAQ06546 454 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 MCL1Q07820 350 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 MED21Q13503 144 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 MOGSQ13724 837 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 DRAP1Q14919 205 aaPredicted RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 TMED2Q15363 201 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 CNPY1Q3B7I2 92 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 TAF1BQ53T94 588 aaPredicted RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 VASNQ6EMK4 673 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 ZNF449Q6P9G9 518 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 MOXD1Q6UVY6 613 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 MARK2Q7KZI7 788 aaKnown RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 NLRP9Q7RTR0 991 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 NECAB2Q7Z6G3 386 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 PCGF5Q86SE9 256 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 ADGRG6Q86SQ4 1221 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 TMPRSS6Q8IU80 811 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 CROCCP3Q8IVE0 287 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 FAM186BQ8IYM0 893 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 SCYL3Q8IZE3 742 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 LRRC43Q8N309 656 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 SCFD1Q8WVM8 642 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 CEP95Q96GE4 821 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 CCDC17Q96LX7 622 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 HAPLN3Q96S86 360 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 TRABDQ9H4I3 376 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 DENND2DQ9H6A0 471 aaPredicted RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 BCAS3Q9H6U6 928 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 TDRD3Q9H7E2 651 aaKnown RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 PTTG2Q9NZH5 202 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 SEL1LQ9UBV2 794 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 BCAP29Q9UHQ4 241 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 DNAJC12Q9UKB3 198 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 STX8Q9UNK0 236 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 NAALADL1Q9UQQ1 740 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 ZNF148Q9UQR1 794 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 PTPN22Q9Y2R2 807 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 B3GALT1Q9Y5Z6 326 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 HCFC2Q9Y5Z7 792 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 CLRN2A0PK11 232 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 ZNF503-AS2A6NEH8 195 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 TBX3O15119 743 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 GPR39O43194 453 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 OPHN1O60890 802 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 SEMA7AO75326 666 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 ENTPD5O75356 428 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 SPAG7O75391 227 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 CSDE1O75534 798 aaKnown RBP6.82□□□□□ -1.32
USP28-202ENST00000535607 LYNP07948 512 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 PABPC4LP0CB38 370 aaKnown RBP6.82□□□□□ -1.32
USP28-202ENST00000535607 MYBL1P10243 752 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 CYP2C8P10632 490 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 ACTN1P12814 892 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 TSHRP16473 764 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 FAHP16930 419 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 EPHX2P34913 555 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 PGM1P36871 562 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 RAP1GDS1P52306 607 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 ARFIP2P53365 341 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 MYL7Q01449 175 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 CDK18Q07002 472 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 ADCY1Q08828 1119 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 SF3A3Q12874 501 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP28-202ENST00000535607 ALCAMQ13740 583 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 KLHL38Q2WGJ6 581 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 ZNF568Q3ZCX4 644 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 USH1GQ495M9 461 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 TBC1D10BQ4KMP7 808 aaPredicted RBP6.82□□□□□ -1.32
USP28-202ENST00000535607 DCAF12L1Q5VU92 463 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 FAM91A1Q658Y4 838 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 FAM47EQ6ZV65 393 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 CLNKQ7Z7G1 428 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 USP37Q86T82 979 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 TRABD2AQ86V40 505 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 DDI1Q8WTU0 396 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 C10orf82Q8WW14 230 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 CLEC4DQ8WXI8 215 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 JADE3Q92613 823 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 APBB2Q92870 758 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 SLC5A5Q92911 643 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 SLC7A6OSQ96CW6 309 aaPredicted RBP6.82□□□□□ -1.32
USP28-202ENST00000535607 DGCR14Q96DF8 476 aaKnown RBP6.82□□□□□ -1.32
USP28-202ENST00000535607 TMEM47Q9BQJ4 181 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 SIKE1Q9BRV8 207 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 IQCGQ9H095 443 aaKnown RBP6.82□□□□□ -1.32
USP28-202ENST00000535607 THAP2Q9H0W7 228 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 VPS11Q9H270 941 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 RANBP17Q9H2T7 1088 aaKnown RBP6.82□□□□□ -1.32
USP28-202ENST00000535607 GOLPH3Q9H4A6 298 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 FAM96AQ9H5X1 160 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 GGA3Q9NZ52 723 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 TBC1D7Q9P0N9 293 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 PGAP2Q9UHJ9 254 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 PAIP2BQ9ULR5 123 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms