RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 PCDHA11Q9Y5I1 949 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 SF3B1O75533 1304 aaKnown RBP eCLIP18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 TMEM189-UBE2V1I3L0A0 370 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 TRDMT1O14717 391 aaKnown RBP18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 GNRH1P01148 92 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 SEPT7Q16181 437 aaKnown RBP18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 NFE2Q16621 373 aaPredicted RBP18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 RAP1GAP2Q684P5 730 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 CCDC63Q8NA47 563 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 RMDN2Q96LZ7 410 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 MAGEB18Q96M61 343 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 KLHL5Q96PQ7 755 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 PHACTR1Q9C0D0 580 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 RRN3Q9NYV6 651 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 RPS6KL1Q9Y6S9 549 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 MICAL3Q7RTP6 2002 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 DOCK4Q8N1I0 1966 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 SZT2Q5T011 3432 aa18.7■□□□□ 0.58
HTATSF1-204ENST00000535601 REV3LO60673 3130 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 CCDC195A0A1B0GUA6 201 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 SDR42E2A6NKP2 422 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 PRPF4O43172 522 aaKnown RBP eCLIP18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 MAXP61244 160 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 CRYMQ14894 314 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 MICALL1Q8N3F8 863 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 ATPAF2Q8N5M1 289 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 PITPNM3Q9BZ71 974 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 GJB3O75712 270 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 ATF6P18850 670 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 FGFR3P22607 806 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 YWHAQP27348 245 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 OR1D2P34982 312 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 TBX4P57082 545 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 NR1H3Q13133 447 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 TEX44Q53QW1 395 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 SPOUT1Q5T280 376 aaKnown RBP18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 LRRC8BQ6P9F7 803 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 CCDC121Q6ZUS5 278 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 PDZD4Q76G19 769 aaPredicted RBP18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 MON1AQ86VX9 555 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 ZSCAN18Q8TBC5 510 aaPredicted RBP18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 ZNF669Q96BR6 464 aaPredicted RBP18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 HDAC11Q96DB2 347 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 AGAP2Q99490 1192 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 CHRAC1Q9NRG0 131 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 SCML2Q9UQR0 700 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 MYLKQ15746 1914 aa18.69■□□□□ 0.58
HTATSF1-204ENST00000535601 CHD9Q3L8U1 2897 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 IQANK1A0A1B0GTG1 560 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 ARHGEF37A1IGU5 675 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 SRRM3A6NNA2 597 aaPredicted RBP18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 DNAJB2P25686 324 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 KCNQ1P51787 676 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 AIF1P55008 147 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 MRPL58Q14197 206 aaKnown RBP18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 CFAP52Q8N1V2 620 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 IPMKQ8NFU5 416 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 ZNF395Q9H8N7 513 aaPredicted RBP18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 SLC12A8A0AV02 714 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 SYN3O14994 580 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 PRKCHP24723 683 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 CRIPAKQ8N1N5 446 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 IGSF8Q969P0 613 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 TBC1D31Q96DN5 1066 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 FERMT1Q9BQL6 677 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 PMPCBO75439 489 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 CCNB1P14635 433 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 SERPINB6P35237 376 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 HCAR3P49019 387 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 PAPOLAP51003 745 aaKnown RBP18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 SARNPP82979 210 aaKnown RBP18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 MGAT5Q09328 741 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 PCSK7Q16549 785 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 SGSM3Q96HU1 749 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 TTPALQ9BTX7 342 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 OSBPL2Q9H1P3 480 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 IGSF9Q9P2J2 1179 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 ACTL7AQ9Y615 435 aa18.68■□□□□ 0.58
HTATSF1-204ENST00000535601 KCNU1A8MYU2 1149 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 J3KR12 359 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 HAPLN1P10915 354 aaPredicted RBP18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 ITGB8P26012 769 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 MNX1P50219 401 aaPredicted RBP18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 C16orf46Q6P387 395 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 RFWD3Q6PCD5 774 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 PHTF1Q9UMS5 762 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 SMG5Q9UPR3 1016 aaKnown RBP18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 FAM159BA6NKW6 160 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 CHRNA4P43681 627 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 TTC39BQ5VTQ0 682 aaPredicted RBP18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 SH2D5Q6ZV89 423 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 SPATA21Q7Z572 469 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 FBXO22Q8NEZ5 403 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 LRRC8CQ8TDW0 803 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 VWCEQ96DN2 955 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 TEKT5Q96M29 485 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 SRPK1Q96SB4 655 aaKnown RBP18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 BRD8Q9H0E9 1235 aa18.67■□□□□ 0.58
HTATSF1-204ENST00000535601 GBA3Q9H227 469 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms