RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GTPBP10A4D1E9 387 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 FAM221BA6H8Z2 402 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 TTC34A8MYJ7 566 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 SLC7A4O43246 635 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 PAPSS1O43252 624 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 BNIP3LO60238 219 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 CLDN11O75508 207 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 F9P00740 461 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 CCR5P51681 352 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 GALCP54803 685 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 SETMARQ53H47 684 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 SYPL2Q5VXT5 272 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 PASD1Q8IV76 773 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 CCAR2Q8N163 923 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 TMEM35BQ8NCS4 154 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 WFDC5Q8TCV5 224 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 P2RY11Q96G91 374 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 RPL10LQ96L21 214 aaKnown RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 ELF4Q99607 663 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 C2orf49Q9BVC5 232 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 NEUROG2Q9H2A3 272 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 KDM4CQ9H3R0 1056 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 WDCPQ9H6R7 721 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 KIAA1468Q9P260 1216 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 ADAMTS1Q9UHI8 967 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
CLSTN3-205ENST00000535452 ITIH6Q6UXX5 1313 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 M0QYT0 321 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 LDOC1O95751 146 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 CALCAP01258 141 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 MZF1P28698 734 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 NOS2P35228 1153 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 RPL34P49207 117 aaKnown RBP13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 CAMK4Q16566 473 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 C9orf64Q5T6V5 341 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 CCNI2Q6ZMN8 369 aaPredicted RBP13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 MMS22LQ6ZRQ5 1243 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 PROSER1Q86XN7 944 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 STK40Q8N2I9 435 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 C1orf131Q8NDD1 294 aaKnown RBP13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 PPP1R16AQ96I34 528 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 SLC6A18Q96N87 628 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 ZSWIM1Q9BR11 485 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 VANGL2Q9ULK5 521 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 DMTF1Q9Y222 760 aa13.64□□□□□ -0.23
CLSTN3-205ENST00000535452 CKAP5Q14008 2032 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 A0A1B0GTQ1 180 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 H0Y8X5 98 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 ALOX15BO15296 676 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 CBFA2T3O75081 653 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 GRAP2O75791 330 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 FYNP06241 537 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 RHOCP08134 193 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 JUPP14923 745 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 DESP17661 470 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 CTSKP43235 329 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 CDH4P55283 916 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 RNASE9P60153 205 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 IL9RQ01113 521 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 SLC6A3Q01959 620 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 OVGP1Q12889 678 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 RAPGEF1Q13905 1077 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 MAN2A1Q16706 1144 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 FSCBQ5H9T9 825 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 BRMS1LQ5PSV4 323 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 NAPEPLDQ6IQ20 393 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 TMPRSS7Q7RTY8 843 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 ATP11CQ8NB49 1132 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 C1orf216Q8TAB5 229 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 SIK2Q9H0K1 926 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 SLCO3A1Q9UIG8 710 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 DNAJC12Q9UKB3 198 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 PCDHGC3Q9UN70 934 aa13.63□□□□□ -0.23
CLSTN3-205ENST00000535452 E9PAM4 449 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 KCNK3O14649 394 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 DAB1O75553 588 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 C1SP09871 688 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 ATXN1LP0C7T5 689 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 C7P10643 843 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 SLC9A1P19634 815 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 SULT1E1P49888 294 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 ADPRHP54922 357 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 DEUP1Q05D60 604 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 AUHQ13825 339 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 ERICH1Q86X53 443 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 APCDD1Q8J025 514 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 PDCD7Q8N8D1 485 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 CNDP2Q96KP4 475 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 MRGPRX3Q96LB0 322 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 SLC2A13Q96QE2 648 aa13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 INTS6Q9UL03 887 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-205ENST00000535452 PCDHGA1Q9Y5H4 931 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms