RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 ZNF333Q96JL9 665 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 B3GALT6Q96L58 329 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 ZNF558Q96NG5 402 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 CWH43Q9H720 699 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 MOCS1Q9NZB8 636 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 MARCH2Q9P0N8 246 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 MICAL3Q7RTP6 2002 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 SLC38A8A6NNN8 435 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 ZBTB24O43167 697 aaPredicted RBP13.71□□□□□ -0.22
BEST1-208ENST00000534553 ASMTLO95671 621 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 MOCS2O96007 188 aaPredicted RBP13.71□□□□□ -0.22
BEST1-208ENST00000534553 VIMP08670 466 aaKnown RBP13.71□□□□□ -0.22
BEST1-208ENST00000534553 CCNB1P14635 433 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 NPY2RP49146 381 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 PGFP49763 221 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 EFEMP1Q12805 493 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 EFTUD2Q15029 972 aaKnown RBP eCLIP13.71□□□□□ -0.22
BEST1-208ENST00000534553 SEPT7Q16181 437 aaKnown RBP13.71□□□□□ -0.22
BEST1-208ENST00000534553 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 SNX30Q5VWJ9 437 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 KCTD11Q693B1 232 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 CASC4Q6P4E1 433 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 TMEM173Q86WV6 379 aaPredicted RBP13.71□□□□□ -0.22
BEST1-208ENST00000534553 ARHGAP12Q8IWW6 846 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 GPR65Q8IYL9 337 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 TTC9BQ8N6N2 239 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 MGARPQ8TDB4 240 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 TMEM169Q96HH4 297 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 IL12RB2Q99665 862 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 IL22Q9GZX6 179 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 CASS4Q9NQ75 786 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 TMEM248Q9NWD8 314 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 WBP1LQ9NX94 342 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 ATP11BQ9Y2G3 1177 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 SLC27A5Q9Y2P5 690 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 SNX10Q9Y5X0 201 aa13.71□□□□□ -0.22
BEST1-208ENST00000534553 GOLGA6L7A0A1B0GV03 622 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 WDR27A2RRH5 827 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 DFFAO00273 331 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 TLR5O60602 858 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 MAFKO60675 156 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 KIAA0754O94854 1291 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 VNN2O95498 520 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 CSH1P0DML2 217 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 CSH2P0DML3 217 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 LAG3P18627 525 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 PPP3CCP48454 512 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 ZBTB17Q13105 803 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 ITIH4Q14624 930 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 PIK3R6Q5UE93 754 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 RSPO2Q6UXX9 243 aaPredicted RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
BEST1-208ENST00000534553 MARK2Q7KZI7 788 aaKnown RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 TP53INP2Q8IXH6 220 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 CMTR2Q8IYT2 770 aaKnown RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 PPM1NQ8N819 430 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 BCL7CQ8WUZ0 217 aaPredicted RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 ZNF689Q96CS4 500 aaPredicted RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 MRRFQ96E11 262 aaKnown RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 CABS1Q96KC9 395 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 AGAP3Q96P47 875 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 FCRL5Q96RD9 977 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 RABEP2Q9H5N1 569 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 PRDM5Q9NQX1 630 aaPredicted RBP13.7□□□□□ -0.22
BEST1-208ENST00000534553 MKS1Q9NXB0 559 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 VANGL2Q9ULK5 521 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
BEST1-208ENST00000534553 UPP2O95045 317 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 JCHAINP01591 159 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 NFKB1P19838 968 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 CD68P34810 354 aaPredicted RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 GRIA1P42261 906 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 GJA8P48165 433 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 DSG1Q02413 1049 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 CREMQ03060 361 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 SLC18A2Q05940 514 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 CDH17Q12864 832 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 MPP2Q14168 576 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 LRRC14Q15048 493 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 MS4A13Q5J8X5 152 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 HHATQ5VTY9 493 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 FOXR1Q6PIV2 292 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 PIGWQ7Z7B1 504 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 LRRC34Q8IZ02 419 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 ZNF683Q8IZ20 524 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 C4orf33Q8N1A6 199 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 BANPQ8N9N5 519 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 CCDC197Q8NCU1 140 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 STKLD1Q8NE28 680 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 ZNF461Q8TAF7 563 aa13.69□□□□□ -0.22
BEST1-208ENST00000534553 ZSCAN18Q8TBC5 510 aaPredicted RBP13.69□□□□□ -0.22
BEST1-208ENST00000534553 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms