RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 PRAMEF10O60809 474 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 VAV1P15498 845 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ITIH1P19827 911 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 GNLYP22749 145 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 DRD3P35462 400 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 DCTP40126 519 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PSEN1P49768 467 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 NDST1P52848 882 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 NR0B2Q15466 257 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 OR6B2Q6IFH4 312 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 RFWD3Q6PCD5 774 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 MMS22LQ6ZRQ5 1243 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 FAM184AQ8NB25 1140 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ZNF548Q8NEK5 533 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 RPL10LQ96L21 214 aaKnown RBP10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 MRGPRX3Q96LB0 322 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CDK5RAP1Q96SZ6 601 aaKnown RBP10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CGRRF1Q99675 332 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CCDC3Q9BQI4 270 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SLCO3A1Q9UIG8 710 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 COL27A1Q8IZC6 1860 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 DOCK9Q9BZ29 2069 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 RP1L1Q8IWN7 2480 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 EDDM13A0A1B0GTR0 161 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 GOLGA6L7A0A1B0GV03 622 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 TARSL2A2RTX5 802 aaKnown RBP10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SEMA7AO75326 666 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 IDEP14735 1019 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 MZF1P28698 734 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 KIF11P52732 1056 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 MAPK10P53779 464 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ZNF699Q32M78 642 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 MCTP1Q6DN14 999 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 MFN1Q8IWA4 741 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 FAM217AQ8IXS0 508 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SLC22A18ASQ8N1D0 253 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 C9orf43Q8TAL5 461 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 LMX1AQ8TE12 382 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ZNF516Q92618 1163 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SYAP1Q96A49 352 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 XYLT2Q9H1B5 865 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PREBQ9HCU5 417 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CLIC5Q9NZA1 410 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 FOXJ2Q9P0K8 574 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ERVW-1Q9UQF0 538 aa10.56□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 RP1P56715 2156 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PRRC2CQ9Y520 2896 aaKnown RBP10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PLRG1O43660 514 aaKnown RBP10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 RNGTTO60942 597 aaKnown RBP10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 VPS4BO75351 444 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 NUDT1P36639 197 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 HNRNPKP61978 463 aaKnown RBP eCLIP10.55□□□□□ -0.725e-7■□□□□ 9.7
NEDD8-MDP1-202ENST00000534348 CNTN1Q12860 1018 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 BIRC3Q13489 604 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SNRNP35Q16560 246 aaKnown RBP10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ZNF667Q5HYK9 610 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 Q6ZSR6 202 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CCDC186Q7Z3E2 898 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PTAR1Q7Z6K3 402 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 TRIM69Q86WT6 500 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CARNMT1Q8N4J0 409 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 TMEM145Q8NBT3 493 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 NDRG1Q92597 394 aaKnown RBP10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PTPRN2Q92932 1015 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 USP7Q93009 1102 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 TTC17Q96AE7 1141 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PLD4Q96BZ4 506 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 IL12RB2Q99665 862 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 STRADBQ9C0K7 418 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 KDM4CQ9H3R0 1056 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 FOXD4L1Q9NU39 408 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SFMBT1Q9UHJ3 866 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ACSL6Q9UKU0 697 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 INTS6Q9UL03 887 aaKnown RBP10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SARDHQ9UL12 918 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 VPS4AQ9UN37 437 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 LOXL2Q9Y4K0 774 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 PDZD2O15018 2839 aa10.55□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 A0A1W2PQU0 124 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 NVLO15381 856 aaKnown RBP10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 AQP9O43315 295 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ASLP04424 464 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ATICP31939 592 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ETV5P41161 510 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CD97P48960 835 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 STK19P49842 368 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 OXCT1P55809 520 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 YWHAGP61981 247 aaKnown RBP eCLIP10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 C1orf61Q13536 156 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 TRIP4Q15650 581 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 BMT2Q1RMZ1 405 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ADGRF1Q5T601 910 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 RNF219Q5W0B1 726 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 TICAM1Q8IUC6 712 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SLC35F3Q8IY50 421 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CRYBG2Q8N1P7 616 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 ZNF276Q8N554 614 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 CYFIP2Q96F07 1278 aa10.54□□□□□ -0.72
NEDD8-MDP1-202ENST00000534348 SLC12A9Q9BXP2 914 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms