RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 C2CD2LO14523 706 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 ALDOAP04075 364 aaKnown RBP13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 CRHR1P34998 444 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 ELF3P78545 371 aaPredicted RBP13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 NAB1Q13506 487 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 SPANXN3Q5MJ09 141 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 ARTNQ5T4W7 220 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 MANEALQ5VSG8 457 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 LHX8Q68G74 356 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 ARHGAP12Q8IWW6 846 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 DCP1BQ8IZD4 617 aaKnown RBP13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 ZNF398Q8TD17 642 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 USP33Q8TEY7 942 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 ZNF669Q96BR6 464 aaPredicted RBP13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 KLHL29Q96CT2 875 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 CERS2Q96G23 380 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 CAPNS2Q96L46 248 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 TRIM55Q9BYV6 548 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 OSER1Q9NX31 292 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 UBP1Q9NZI7 540 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 BFARQ9NZS9 450 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 ZFATQ9P243 1243 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 TRIM33Q9UPN9 1127 aa13.95□□□□□ -0.18
FOXRED1-218ENST00000534315 TRPA1O75762 1119 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 MOCS2O96007 188 aaPredicted RBP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 CCNB1P14635 433 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 NQO1P15559 274 aaKnown RBP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 HOXC13P31276 330 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 COG7P83436 770 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 DDR2Q16832 855 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 KIF2BQ8N4N8 673 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 CNTD1Q8N815 330 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 FCRL2Q96LA5 508 aaPredicted RBP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 FAM193BQ96PV7 902 aaPredicted RBP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 MAGED2Q9UNF1 606 aaPredicted RBP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 TPP1O14773 563 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 KLF11O14901 512 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 TADA2AO75478 443 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 UNC5CO95185 931 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 INHAP05111 366 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 GRK4P32298 578 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 PPP2R5DQ14738 602 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 VARS2Q5ST30 1063 aaKnown RBP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 OTOP3Q7RTS5 596 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 PARP9Q8IXQ6 854 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 ATPAF2Q8N5M1 289 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 TBC1D31Q96DN5 1066 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 NDFIP2Q9NV92 336 aa13.94□□□□□ -0.18
FOXRED1-218ENST00000534315 A0A0G2JND7 137 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 CCDC195A0A1B0GUA6 201 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 KIF3CO14782 793 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 ATP9BO43861 1147 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 ITGA2BP08514 1039 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 SKIV2L2P42285 1042 aaKnown RBP13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 ZNF33AQ06730 810 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 CES4AQ5XG92 561 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 LRRC8DQ7L1W4 858 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 ASRGL1Q7L266 308 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 TMEM135Q86UB9 458 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 ZNF419Q96HQ0 510 aaPredicted RBP13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 FUBP3Q96I24 572 aaKnown RBP eCLIP13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 TSGA13Q96PP4 275 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 GPBP1L1Q9HC44 474 aaPredicted RBP13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 TMEM161AQ9NX61 479 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 SIRPGQ9P1W8 387 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 SCML2Q9UQR0 700 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 NUMBLQ9Y6R0 609 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
FOXRED1-218ENST00000534315 ZCWPW2A0A1B0GU75 182 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 KCNU1A8MYU2 1149 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 FGF10O15520 208 aaPredicted RBP13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 MGRN1O60291 552 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 USP1O94782 785 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 TGDSO95455 350 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 IL1BP01584 269 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 TPH1P17752 444 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 CCNCP24863 283 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 GP5P40197 560 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 USP46P62068 366 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 TMPRSS15P98073 1019 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 BST1Q10588 318 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 PDE1CQ14123 709 aaPredicted RBP13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 CHI3L2Q15782 390 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 NFE2Q16621 373 aaPredicted RBP13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 ANKRD20A4Q4UJ75 823 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 C14orf80Q86SX3 495 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 NUDCD3Q8IVD9 361 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 NUP93Q8N1F7 819 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 TTC9BQ8N6N2 239 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 ACMSDQ8TDX5 336 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 PXYLP1Q8TE99 480 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
FOXRED1-218ENST00000534315 MFSD3Q96ES6 412 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms