RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 SLC36A4Q6YBV0 504 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 SETD3Q86TU7 594 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 TMPRSS6Q8IU80 811 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 DRC7Q8IY82 874 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 APCDD1Q8J025 514 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 KDM1BQ8NB78 822 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 OR2T3Q8NH03 318 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 OLIG1Q8TAK6 271 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 CENPIQ92674 756 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 NTAN1Q96AB6 310 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 ZC3H10Q96K80 434 aaKnown RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 LMLNQ96KR4 655 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 FEM1AQ9BSK4 669 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 C2orf49Q9BVC5 232 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 SLC6A17Q9H1V8 727 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 INTS6Q9UL03 887 aaKnown RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 EDDM13A0A1B0GTR0 161 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 DRGXA6NNA5 263 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 I6L893 689 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 AP5Z1O43299 807 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 DNTTP04053 509 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 EIF4A3P38919 411 aaKnown RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 CTSOP43234 321 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 AIF1P55008 147 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 RPL6Q02878 288 aaKnown RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 CREB5Q02930 508 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 SFSWAPQ12872 951 aaKnown RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 HNRNPA1L2Q32P51 320 aaKnown RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 MAP7D1Q3KQU3 841 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 ACCSLQ4AC99 568 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 RAB6CQ53S08 254 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 ALFQ53S48 1182 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 CCDC185Q8N715 623 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 GANCQ8TET4 914 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 TBC1D31Q96DN5 1066 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 RPL10LQ96L21 214 aaKnown RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 EPAS1Q99814 870 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 SPON2Q9BUD6 331 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 RAB6CQ9H0N0 254 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 ISCUQ9H1K1 167 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 OSBPL2Q9H1P3 480 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 DUSP15Q9H1R2 295 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 ARRDC1-AS1Q9H2J1 176 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 TMEM245Q9H330 911 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 PPARGC1AQ9UBK2 798 aaKnown RBP13.75□□□□□ -0.21
CAPN1-227ENST00000533909 TBC1D30Q9Y2I9 924 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 USP34Q70CQ2 3546 aa13.75□□□□□ -0.21
CAPN1-227ENST00000533909 FRYLO94915 3013 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 IGLV3-10A0A075B6K4 115 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 A0A087X0T9 212 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 TMEM191CA6NGB0 347 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 CREB3O43889 395 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 AKR1B10O60218 316 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 PRPSAP2O60256 369 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 LRP3O75074 770 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 EPN2O95208 641 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 FAM228BP0C875 321 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 BCKDHBP21953 392 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 OXTRP30559 389 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 HNRNPH3P31942 346 aaKnown RBP13.74□□□□□ -0.21
CAPN1-227ENST00000533909 STK19P49842 368 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-227ENST00000533909 PLK1P53350 603 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 CAMK2GQ13555 558 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-227ENST00000533909 TTC31Q49AM3 519 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-227ENST00000533909 ZNF776Q68DI1 518 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-227ENST00000533909 SARM1Q6SZW1 724 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 CYP2U1Q7Z449 544 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 ZNF354CQ86Y25 554 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 NCAPGQ9BPX3 1015 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 MKRN2Q9H000 416 aaKnown RBP13.74□□□□□ -0.21
CAPN1-227ENST00000533909 PRSS16Q9NQE7 514 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 ABHD10Q9NUJ1 306 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 ARHGAP20Q9P2F6 1191 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 PCDHGA5Q9Y5G8 931 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
CAPN1-227ENST00000533909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 ILVBLA1L0T0 632 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
CAPN1-227ENST00000533909 TTC34A8MYJ7 566 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 AKR1B15C9JRZ8 316 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-227ENST00000533909 CBX4O00257 560 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 FOXD2O60548 495 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-227ENST00000533909 MFAP3LO75121 409 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 SIN3BO75182 1162 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 RHOQP17081 205 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 EPHB2P29323 1055 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 CD6P30203 668 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 ETFBP38117 255 aa13.73□□□□□ -0.21
CAPN1-227ENST00000533909 ADKP55263 362 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms