RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 IL27RAQ6UWB1 636 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 NOP9Q86U38 636 aaKnown RBP15.91■□□□□ 0.14
CPSF1-211ENST00000533492 ANKRD20A12PQ8NF67 263 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 GPT2Q8TD30 523 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 BIRC7Q96CA5 298 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 TKTL2Q9H0I9 626 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 PIGVQ9NUD9 493 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 TMEM51Q9NW97 253 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 SLC25A13Q9UJS0 675 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 ITIH6Q6UXX5 1313 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 A0A1B0GVT2 93 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 A0A1W2PP55 124 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 GOLGA8SH3BPF8 625 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CLDN11O75508 207 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 GJB3O75712 270 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 RNASEH2AO75792 299 aaKnown RBP15.9■□□□□ 0.14
CPSF1-211ENST00000533492 GFPT2O94808 682 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 ADCY5O95622 1261 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CER1O95813 267 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 MMEP08473 750 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 ZNF18P17022 549 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CD27P26842 260 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 SCNN1AP37088 669 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 GGCXP38435 758 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CSNK1EP49674 416 aaKnown RBP15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CXCR3P49682 368 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 POLR2FP61218 127 aaKnown RBP15.9■□□□□ 0.14
CPSF1-211ENST00000533492 ACCSLQ4AC99 568 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CDKAL1Q5VV42 579 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CXorf57Q6NSI4 855 aaKnown RBP15.9■□□□□ 0.14
CPSF1-211ENST00000533492 LRRC31Q6UY01 552 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 XYLT1Q86Y38 959 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 STK40Q8N2I9 435 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 C1orf216Q8TAB5 229 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CPA5Q8WXQ8 436 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 PTPRN2Q92932 1015 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 PCMTD1Q96MG8 357 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-211ENST00000533492 FAM129BQ96TA1 746 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 GAREM1Q9H706 876 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 FAM207AQ9NSI2 230 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-211ENST00000533492 ANO10Q9NW15 660 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 FANCLQ9NW38 375 aa15.9■□□□□ 0.14
CPSF1-211ENST00000533492 CHD8Q9HCK8 2581 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 LRRC72A6NJI9 287 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 SH3BP5O60239 455 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 IL1BP01584 269 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 CDK11BP21127 795 aaKnown RBP15.89■□□□□ 0.13
CPSF1-211ENST00000533492 C5AR1P21730 350 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 PSMD8P48556 350 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 GALCP54803 685 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 CDH4P55283 916 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 ELAVL3Q14576 367 aaKnown RBP15.89■□□□□ 0.13
CPSF1-211ENST00000533492 ST3GAL2Q16842 350 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 HLA-BQ31612 363 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 SLC25A52Q3SY17 297 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 C2CD6Q53TS8 623 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 NAA35Q5VZE5 725 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 KIAA0895LQ68EN5 471 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 RBM43Q6ZSC3 357 aaKnown RBP15.89■□□□□ 0.13
CPSF1-211ENST00000533492 ADAT2Q7Z6V5 191 aaKnown RBP15.89■□□□□ 0.13
CPSF1-211ENST00000533492 C14orf80Q86SX3 495 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 ZNF677Q86XU0 584 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 EPS8L1Q8TE68 723 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 NT5C3BQ969T7 300 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 PGAP3Q96FM1 320 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-211ENST00000533492 SPAG5Q96R06 1193 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 TBCBQ99426 244 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 FEM1AQ9BSK4 669 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 MUC3BQ9H195 1237 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 NEUROG2Q9H2A3 272 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 TM9SF3Q9HD45 589 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 NLRC4Q9NPP4 1024 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 ARHGEF38Q9NXL2 777 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 VPS28Q9UK41 221 aa15.89■□□□□ 0.13
CPSF1-211ENST00000533492 KNL1Q8NG31 2342 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 ADH1BP00325 375 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 TFE3P19532 575 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-211ENST00000533492 SOX5P35711 763 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 KLK7P49862 253 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 IRAK1P51617 712 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 NOMO3P69849 1222 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 TRIP6Q15654 476 aaKnown RBP15.88■□□□□ 0.13
CPSF1-211ENST00000533492 C5orf22Q49AR2 442 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 ACBD5Q5T8D3 534 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-211ENST00000533492 OTUD1Q5VV17 481 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-211ENST00000533492 NCEH1Q6PIU2 408 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 DSG4Q86SJ6 1040 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 NAXDQ8IW45 347 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 OR14C36Q8NHC7 312 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 SETD7Q8WTS6 366 aaKnown RBP15.88■□□□□ 0.13
CPSF1-211ENST00000533492 OR8D1Q8WZ84 308 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 CAMK1GQ96NX5 476 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 ADAM33Q9BZ11 813 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 GANQ9H2C0 597 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 IL21RQ9HBE5 538 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 OSGEPQ9NPF4 335 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 TM7SF3Q9NS93 570 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 SERGEFQ9UGK8 458 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 FZD4Q9ULV1 537 aa15.88■□□□□ 0.13
CPSF1-211ENST00000533492 DAAM1Q9Y4D1 1078 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms